Detailed information    

insolico Bioinformatically predicted

Overview

Name   recA   Type   Machinery gene
Locus tag   G4P54_RS08845 Genome accession   NZ_CP048852
Coordinates   1672258..1673304 (+) Length   348 a.a.
NCBI ID   WP_024715994.1    Uniprot ID   A0A6H0WID2
Organism   Bacillus tequilensis strain EA-CB0015     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1667258..1678304
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G4P54_RS08815 (G4P54_08790) ymfI 1667272..1668000 (+) 729 WP_167872386.1 elongation factor P 5-aminopentanone reductase -
  G4P54_RS08820 (G4P54_08795) - 1668081..1668338 (+) 258 WP_024715997.1 DUF3243 domain-containing protein -
  G4P54_RS08825 (G4P54_08800) - 1668468..1669259 (+) 792 WP_167872387.1 DUF3388 domain-containing protein -
  G4P54_RS08830 (G4P54_08805) rodZ 1669278..1670186 (+) 909 WP_167872388.1 cell shape determination protein RodZ -
  G4P54_RS08835 (G4P54_08810) pgsA 1670236..1670817 (+) 582 WP_167872389.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase -
  G4P54_RS08840 (G4P54_08815) cinA 1670836..1672086 (+) 1251 WP_167872390.1 competence/damage-inducible protein A Machinery gene
  G4P54_RS08845 (G4P54_08820) recA 1672258..1673304 (+) 1047 WP_024715994.1 recombinase RecA Machinery gene
  G4P54_RS08850 (G4P54_08825) - 1673473..1674648 (+) 1176 WP_024715993.1 serine hydrolase domain-containing protein -
  G4P54_RS08855 (G4P54_08830) rny 1674923..1676485 (+) 1563 WP_003221010.1 ribonuclease Y -
  G4P54_RS08860 (G4P54_08835) ymdB 1676555..1677349 (+) 795 WP_024715992.1 2',3'-cyclic-nucleotide 2'-phosphodiesterase -
  G4P54_RS08865 (G4P54_08840) spoVS 1677549..1677809 (+) 261 WP_003154135.1 stage V sporulation protein SpoVS -

Sequence

Protein


Download         Length: 348 a.a.        Molecular weight: 38024.21 Da        Isoelectric Point: 4.8528

>NTDB_id=423560 G4P54_RS08845 WP_024715994.1 1672258..1673304(+) (recA) [Bacillus tequilensis strain EA-CB0015]
MSDRQAALDMALKQIEKQFGKGSIMKLGEKTDTRISTVPSGSLALDTALGIGGYPRGRIIEVYGPESSGKTTVALHAIAE
VQQQGGQAAFIDAEHALDPVYAQKLGVNIEELLLSQPDTGEQALEIAEALVRSGAVDIVVIDSVAALVPKAEIEGDMGDS
HVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAEQLKQGNDVMGNKT
KIKVVKNKVAPPFRTAEVDIMYGEGISKEGEIIDLGTELDIVQKSGSWYSYEEERLGQGRENAKQFLKENKDIMLMIQEQ
IREHYGLDNHGAVQKQAEDAQEELEFEE

Nucleotide


Download         Length: 1047 bp        

>NTDB_id=423560 G4P54_RS08845 WP_024715994.1 1672258..1673304(+) (recA) [Bacillus tequilensis strain EA-CB0015]
ATGAGTGATCGTCAGGCAGCCTTAGATATGGCTCTTAAACAAATAGAAAAACAGTTCGGCAAAGGTTCCATTATGAAACT
GGGAGAAAAGACAGATACAAGAATTTCTACTGTCCCAAGCGGCTCCCTCGCTCTTGATACGGCACTGGGAATTGGCGGAT
ATCCGCGCGGACGGATTATTGAAGTATACGGTCCTGAAAGTTCAGGTAAAACAACTGTGGCGCTTCATGCGATTGCTGAG
GTTCAGCAGCAGGGCGGACAAGCTGCGTTTATCGATGCGGAACATGCGTTAGATCCGGTATACGCGCAAAAGCTCGGTGT
CAACATCGAAGAGCTTTTACTGTCTCAGCCTGACACAGGCGAGCAGGCGCTTGAAATCGCGGAAGCGTTGGTTCGAAGCG
GTGCAGTTGACATTGTTGTTATCGACTCTGTGGCGGCTCTCGTTCCGAAAGCGGAAATTGAAGGCGACATGGGAGATTCA
CATGTCGGTTTACAAGCGCGCTTAATGTCTCAAGCGCTCCGAAAGCTTTCAGGGGCCATTAACAAATCGAAGACAATCGC
GATTTTCATCAACCAAATTCGTGAAAAAGTAGGCGTTATGTTCGGGAACCCGGAAACAACTCCTGGCGGCCGTGCGCTGA
AATTCTACTCTTCCGTACGTCTTGAAGTGCGCCGTGCTGAACAGCTGAAACAAGGCAACGACGTAATGGGGAACAAAACG
AAAATCAAAGTCGTGAAAAACAAGGTGGCTCCGCCGTTCCGTACAGCCGAGGTTGACATTATGTATGGAGAAGGCATTTC
AAAAGAAGGCGAAATCATTGATCTTGGAACTGAACTTGATATCGTGCAAAAAAGCGGTTCATGGTACTCTTATGAAGAAG
AGCGTCTTGGCCAAGGCCGTGAAAATGCAAAGCAATTCTTGAAAGAAAATAAAGATATCATGCTGATGATCCAGGAGCAA
ATTCGCGAACATTACGGTTTGGACAATCATGGAGCAGTGCAGAAGCAAGCTGAAGATGCACAAGAAGAACTCGAATTTGA
AGAATAA

Domains

Predicted by InterproScan.

recA bacterial DNA recombination protein (RecA)

(7-267)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6H0WID2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Bacillus subtilis subsp. subtilis str. 168

98.276

100

0.983
  recA Latilactobacillus sakei subsp. sakei 23K

74.618

93.966

0.701
  recA Streptococcus pneumoniae R6

65.625

100

0.664
  recA Streptococcus pneumoniae Rx1

65.625

100

0.664
  recA Streptococcus pneumoniae D39

65.625

100

0.664
  recA Streptococcus pneumoniae TIGR4

65.625

100

0.664
  recA Streptococcus mitis NCTC 12261

68.485

94.828

0.649
  recA Streptococcus mitis SK321

68.182

94.828

0.647
  recA Streptococcus mutans UA159

68.085

94.54

0.644
  recA Streptococcus pyogenes NZ131

67.378

94.253

0.635
  recA Lactococcus lactis subsp. cremoris KW2

66.061

94.828

0.626
  recA Ralstonia pseudosolanacearum GMI1000

65.046

94.54

0.615
  recA Neisseria gonorrhoeae strain FA1090

64.742

94.54

0.612
  recA Neisseria gonorrhoeae MS11

64.742

94.54

0.612
  recA Neisseria gonorrhoeae MS11

64.742

94.54

0.612
  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

61.988

98.276

0.609
  recA Helicobacter pylori 26695

64.923

93.391

0.606
  recA Helicobacter pylori strain NCTC11637

64.923

93.391

0.606
  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

63.609

93.966

0.598
  recA Glaesserella parasuis strain SC1401

60

99.138

0.595
  recA Vibrio cholerae O1 biovar El Tor strain E7946

60.174

98.851

0.595
  recA Vibrio cholerae strain A1552

60.174

98.851

0.595
  recA Acinetobacter baylyi ADP1

60.411

97.989

0.592
  recA Acinetobacter baumannii D1279779

60.651

97.126

0.589
  recA Pseudomonas stutzeri DSM 10701

62.5

91.954

0.575
  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

60.372

92.816

0.56