Detailed information NTG0422457

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: G3T16_RS14010
• Genome accession: NZ_CP048711
• Coordinates: 3182075..3183436 (-)
• Length: 453 a.a.
• NCBI ID: WP_163495786.1
• Uniprot ID: -
• Organism: Kineobactrum salinum strain M2
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 3177075..3188436

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G3T16_RS13995 (G3T16_13995)	-	3177902..3178426 (+)	525	WP_163495784.1	PilX N-terminal domain-containing pilus assembly protein	-
G3T16_RS14000 (G3T16_14000)	-	3178436..3181600 (+)	3165	WP_163495785.1	pilus assembly protein	-
G3T16_RS14005 (G3T16_14005)	-	3181597..3182064 (+)	468	WP_269473227.1	type IV pilin protein	-
G3T16_RS14010 (G3T16_14010)	pilR	3182075..3183436 (-)	1362	WP_163495786.1	sigma-54 dependent transcriptional regulator	Regulator
G3T16_RS14015 (G3T16_14015)	-	3183444..3185069 (-)	1626	WP_232059086.1	ATP-binding protein	-
G3T16_RS14020 (G3T16_14020)	-	3185478..3187108 (+)	1631	Protein_2853	NAD+ synthase	-
G3T16_RS14025 (G3T16_14025)	-	3187133..3188017 (-)	885	WP_163495787.1	outer membrane protein assembly factor BamD	-

Sequence

Protein

• Length: 453 a.a.
• Molecular weight: 49469.64 Da
• Isoelectric Point: 5.5264

>NTDB_id=422457 G3T16_RS14010 WP_163495786.1 3182075..3183436(-) (pilR) [Kineobactrum salinum strain M2]
MTAQTVLIVDDEPDIRELLAITLSRMGLESLSAATLQQAREQMAAVQPDLCLTDMRLPDGNGINLVEYINREYPHIPVAM
ITAHGSVETAISALKAGAFDFISKPIELDRLRSLVNAALRLNRTPEAGPGHGKLQLIGHAPRIVALREQIEKLARSQAPV
HIRGESGVGKEVVARLIHGSGPRADKPFIAVNCGAIPRELMESEFFGHLKGSFTGANRDKQGLFQAAEGGTLFLDEVADL
PLSMQVKLLRAIQEKTVRPVGASEELTTDVRLLSATHKNLAAEVRAGDFRNDLYYRINVIDIQVPSLRERLEDLPELVSA
LLARIAGSDGGTPPTLAPAALEALRGYHFPGNVRELENILERACALADQQQITVADLQLPASPAPEDQPARSPGTVEVEA
AFGQLEVYLEDVERQIISAALEQSRWNKTATARLLGISFRSLRYRLKKLQLED

Nucleotide

• Length: 1362 bp

>NTDB_id=422457 G3T16_RS14010 WP_163495786.1 3182075..3183436(-) (pilR) [Kineobactrum salinum strain M2]
ATGACTGCGCAAACCGTGCTTATCGTCGATGACGAACCCGACATCCGCGAACTGCTGGCGATTACGCTGAGCCGGATGGG
TCTGGAGTCACTTAGCGCGGCCACGCTGCAGCAGGCGCGGGAGCAAATGGCCGCGGTGCAGCCGGACCTGTGCCTGACCG
ATATGCGCTTGCCCGATGGCAACGGCATCAATCTGGTGGAATACATCAACCGCGAGTATCCCCATATACCGGTCGCGATG
ATCACTGCCCACGGCAGCGTGGAGACGGCGATTTCCGCGCTCAAAGCCGGAGCTTTCGACTTCATCAGCAAGCCCATCGA
ATTGGATCGGCTGCGCAGCCTGGTCAATGCTGCGCTGCGGCTGAACCGGACACCCGAGGCCGGGCCAGGCCACGGCAAAC
TGCAACTGATCGGTCATGCGCCGCGCATCGTCGCGCTGCGGGAGCAGATCGAAAAACTGGCCCGCAGCCAGGCGCCGGTC
CATATCCGCGGCGAATCCGGTGTCGGCAAGGAAGTGGTAGCCAGGTTGATCCACGGCAGCGGGCCGCGGGCAGACAAGCC
CTTTATCGCCGTCAACTGCGGCGCGATTCCACGCGAATTGATGGAGAGCGAGTTCTTTGGTCACCTGAAGGGCAGTTTTA
CCGGCGCCAATCGCGACAAGCAGGGCCTGTTCCAGGCTGCTGAGGGCGGCACGCTGTTTCTGGACGAAGTGGCGGACCTG
CCCCTGTCCATGCAGGTCAAACTGCTGCGCGCAATCCAGGAAAAAACCGTGCGGCCGGTGGGTGCCAGCGAAGAACTGAC
AACCGACGTGCGGCTGCTCAGCGCCACCCACAAGAATCTCGCCGCCGAAGTCCGCGCCGGGGACTTCCGCAACGACCTGT
ACTACCGGATCAATGTGATCGACATCCAGGTACCCAGTCTGCGCGAACGGCTGGAGGACCTGCCAGAGCTGGTCTCGGCG
CTGCTGGCGCGCATTGCCGGGTCGGACGGTGGAACGCCGCCGACGCTGGCCCCCGCGGCCCTGGAAGCACTGCGCGGCTA
CCACTTCCCCGGCAATGTACGCGAGCTGGAGAATATCCTGGAACGGGCCTGTGCGCTGGCGGATCAACAGCAGATCACAG
TGGCCGACCTGCAGTTGCCCGCAAGCCCGGCGCCGGAGGATCAGCCCGCCAGGTCACCGGGCACGGTCGAGGTGGAAGCT
GCGTTTGGCCAGCTGGAAGTGTATCTGGAGGACGTGGAACGGCAGATCATCAGCGCGGCGCTGGAGCAATCCCGCTGGAA
CAAGACCGCCACCGCCAGATTGCTGGGCATCAGTTTTCGCAGCCTGCGCTACCGCCTGAAGAAGCTGCAACTGGAGGATT
GA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (409-449)

• Sigma-54 interaction domain (Sigma54_activat) (136-303)

• Response regulator receiver domain (Response_reg) (6-115)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	61.726	99.779	0.616
pilR	Acinetobacter baumannii strain A118	47.845	100	0.49
luxO	Vibrio cholerae strain A1552	37.808	98.675	0.373