Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   G3T58_RS16085 Genome accession   NZ_CP048687
Coordinates   3157261..3158055 (+) Length   264 a.a.
NCBI ID   WP_014297988.1    Uniprot ID   A0A1J9YJW5
Organism   Bacillus paranthracis strain MN1F     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 3152261..3163055
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G3T58_RS16070 argR 3153101..3153550 (+) 450 WP_001032581.1 arginine repressor ArgR -
  G3T58_RS16075 recN 3153817..3155556 (+) 1740 WP_000947749.1 DNA repair protein RecN Machinery gene
  G3T58_RS16080 spoIVB 3155675..3156973 (+) 1299 WP_002028467.1 SpoIVB peptidase -
  G3T58_RS16085 spo0A 3157261..3158055 (+) 795 WP_014297988.1 sporulation transcription factor Spo0A Regulator
  G3T58_RS16090 - 3158309..3158455 (-) 147 WP_000803575.1 YycC family protein -
  G3T58_RS16095 - 3158506..3159234 (+) 729 WP_000172554.1 glycerophosphodiester phosphodiesterase -
  G3T58_RS16100 - 3159284..3159517 (-) 234 WP_001190187.1 DUF2627 domain-containing protein -
  G3T58_RS16105 - 3159654..3161726 (+) 2073 WP_000811010.1 sigma-54-dependent Fis family transcriptional regulator -
  G3T58_RS16110 yqiS 3161922..3162821 (+) 900 WP_000763079.1 phosphate butyryltransferase -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29454.20 Da        Isoelectric Point: 7.4719

>NTDB_id=422344 G3T58_RS16085 WP_014297988.1 3157261..3158055(+) (spo0A) [Bacillus paranthracis strain MN1F]
MEKIKVCLVDDNKELVSMLESYVAAQEDMEVIGTAYNGQECLNLLKDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANATIKRPLPSFRSATTVDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=422344 G3T58_RS16085 WP_014297988.1 3157261..3158055(+) (spo0A) [Bacillus paranthracis strain MN1F]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTAGTATCAATGCTAGAGAGTTATGTAGCTGCTCAAGA
GGATATGGAAGTAATTGGTACTGCTTATAATGGTCAAGAGTGTTTAAATTTATTAAAAGATAAGCAGCCGGATGTACTTG
TATTAGATATTATTATGCCACATTTAGATGGGTTAGCTGTACTAGAGAAAATGCGCCATATTGAAAGGTTAAGACAGCCT
AGCGTAATTATGTTGACAGCGTTTGGACAAGAAGATGTGACGAAAAAAGCAGTTGACTTAGGTGCGTCATATTTCATATT
AAAACCATTTGATATGGAGAATTTAACGAGTCATATTCGTCAAGTGAGCGGTAAAGCGAACGCTACTATTAAACGTCCAC
TGCCATCTTTCCGATCAGCAACAACAGTAGATGGAAAACCGAAAAACTTAGATGCAAGCATTACGAGTATCATTCATGAA
ATTGGTGTGCCTGCTCATATTAAAGGGTACATGTACTTAAGGGAAGCAATTTCTATGGTGTACAATGACATCGAATTACT
GGGATCTATTACGAAAGTATTGTATCCAGATATCGCGAAGAAATATAATACAACAGCAAGCCGTGTCGAGCGTGCAATCC
GTCACGCAATTGAAGTAGCATGGAGTCGTGGGAATATCGATTCTATTTCGTCCTTATTCGGTTATACAGTATCTATGTCA
AAAGCAAAACCTACGAACTCTGAGTTCATCGCAATGGTTGCGGATAAGTTGAGACTTGAACATAAGGCTAGCTGA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1J9YJW5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

81.273

100

0.822

Multiple sequence alignment