Detailed information NTG0422243

Bioinformatically predicted

Overview

• Name: comA/comEC
• Type: Machinery gene
• Locus tag: G0030_RS09690
• Genome accession: NZ_CP048681
• Coordinates: 2060315..2062717 (-)
• Length: 800 a.a.
• NCBI ID: WP_180182287.1
• Uniprot ID: -
• Organism: Acinetobacter indicus strain Q186-3_T
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Prophage	2055635..2068425	2060315..2062717	within	0

Gene organization within MGE regions

Location: 2055635..2068425

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G0030_RS09665 (G0030_09655)	purM	2055635..2056705 (+)	1071	WP_005176576.1	phosphoribosylformylglycinamidine cyclo-ligase	-
G0030_RS09670 (G0030_09660)	purN	2056712..2057341 (+)	630	WP_016660003.1	phosphoribosylglycinamide formyltransferase	-
G0030_RS09675 (G0030_09665)	-	2057418..2058221 (-)	804	WP_005176572.1	alpha/beta fold hydrolase	-
G0030_RS09680 (G0030_09670)	sppA	2058218..2059243 (-)	1026	WP_045795154.1	signal peptide peptidase SppA	-
G0030_RS09685 (G0030_09675)	-	2059374..2060318 (+)	945	WP_180103592.1	lysophospholipid acyltransferase family protein	-
G0030_RS09690 (G0030_09680)	comA/comEC	2060315..2062717 (-)	2403	WP_180182287.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
G0030_RS09695 (G0030_09685)	lolD	2062803..2063486 (-)	684	WP_005176563.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
G0030_RS09700 (G0030_09690)	-	2063479..2064714 (-)	1236	WP_005176562.1	lipoprotein-releasing ABC transporter permease subunit	-
G0030_RS09705 (G0030_09695)	-	2064740..2065306 (+)	567	WP_005176561.1	PilZ domain-containing protein	-
G0030_RS09710 (G0030_09700)	-	2065294..2066217 (-)	924	WP_005176560.1	DMT family transporter	-
G0030_RS09715 (G0030_09705)	-	2066223..2066690 (-)	468	WP_160232612.1	YaiI/YqxD family protein	-
G0030_RS09720 (G0030_09710)	-	2066955..2067887 (+)	933	WP_075168247.1	hypothetical protein	-
G0030_RS09725	-	2068285..2068425 (+)	141	WP_005176552.1	hypothetical protein	-

Sequence

Protein

• Length: 800 a.a.
• Molecular weight: 91460.46 Da
• Isoelectric Point: 7.3978

>NTDB_id=422243 G0030_RS09690 WP_180182287.1 2060315..2062717(-) (comA/comEC) [Acinetobacter indicus strain Q186-3_T]
MFKIMGAGWIVGIACMGKTLWPMLDFPLWLSGLLLIILLLQQIAALHWSHLGIQLINTCVAFVITFLLGLNFAQNQLQER
LIFRELTRQPAEVVVYVQQINQLGSSQLRQPVQVLNRHSQPVQWLALLPAEQELQLGRYYRLQGQTLPAHSFAVPGAFDV
EQWYLQQNIMSGFQVQSIVELTESELYRLGFGAHLRQHQQLWPQFKLWIETQRLQIRDFIQQQALQHPGLILALLTGDKS
LLDEATEQQFQRFGMSHLLAISGPHVLIFAAMLCFVLQRLVTRYWPELYAQLPRSYLLLLPFMGCVFVYCAYVGFEIPAL
RTLLICLVAGACLLLKQPIQPLSLLIGSASLLLLLDPLSVLSAAFWLSYGACFVLLRIYQTLRQQPVHPQQTLMQKLWQG
FRLLFESQWKIFIALFPLMIIFFKQIAWIAPLSNLLAIPWIGLVIVPLDILAGLSFYLAEPLSQLLFQLNDLALSLLLGC
LQLLDLLFAPQLIPVALSPPMLLSLVLGLMILFLPAGLVPKVWSALCLLPLLFQDQFSRQVELTVLDVGQGQAIFLRYRE
HSMMIDMGGHYDEQKWSIGRQIIQPFLSVKGVQQLDYLWLTHLDQDHSGAYQTLKPQLQVQQVYANAQLEVNPHSHFDYC
QQGQQWQWQPGIQIQVLSPKPEQLNPVEQQKNESSCVLLVEFAQAQPYSRFLLMGDAGWPTEYQLLQDYPDLKVDVLVLG
HHGSRHSSSYQFLKQLEPKLAIASAGLNNRYGHPSTQVQARLNALKIPLWQTAQQGSIQFYPTENEVLPYRHTRVWLRRD

Nucleotide

• Length: 2403 bp

>NTDB_id=422243 G0030_RS09690 WP_180182287.1 2060315..2062717(-) (comA/comEC) [Acinetobacter indicus strain Q186-3_T]
ATGTTCAAAATCATGGGTGCCGGCTGGATTGTAGGTATTGCCTGTATGGGCAAAACGCTATGGCCGATGCTGGATTTCCC
GCTCTGGTTGTCAGGCCTGTTACTGATTATCCTGCTTTTACAGCAAATAGCTGCTTTACATTGGTCCCATCTGGGCATCC
AATTGATTAATACCTGTGTGGCATTTGTCATTACATTTTTGTTGGGGCTGAATTTTGCCCAAAACCAGTTGCAAGAGCGG
TTGATATTTCGTGAACTGACCCGCCAGCCGGCAGAGGTGGTGGTCTATGTCCAGCAAATCAATCAGCTGGGTAGCAGCCA
GCTCCGGCAACCGGTTCAGGTGCTGAACCGGCATAGCCAGCCGGTGCAATGGCTGGCCTTGCTGCCGGCTGAACAGGAAC
TACAGCTGGGGCGTTATTATCGTTTACAGGGGCAGACCTTGCCGGCGCACAGTTTTGCCGTTCCGGGTGCGTTTGATGTA
GAGCAGTGGTATCTCCAGCAAAATATCATGAGCGGCTTTCAGGTCCAGTCGATTGTGGAACTGACTGAATCGGAACTGTA
TCGGCTGGGATTTGGGGCACATTTAAGACAGCATCAGCAACTCTGGCCGCAATTTAAATTGTGGATCGAAACACAGCGTT
TACAGATTCGTGACTTTATCCAGCAGCAGGCATTGCAGCATCCCGGCTTAATACTGGCACTGCTGACTGGCGATAAAAGT
TTACTCGATGAAGCCACCGAGCAGCAGTTTCAGCGTTTCGGGATGAGTCATTTGCTGGCGATTTCCGGGCCGCATGTGCT
GATTTTTGCCGCCATGCTGTGTTTTGTGCTGCAGCGCCTGGTCACTCGCTATTGGCCCGAATTATATGCGCAATTGCCCC
GAAGTTATCTGCTGTTGCTGCCGTTTATGGGCTGTGTATTTGTATATTGTGCCTATGTTGGGTTTGAAATTCCTGCGCTC
AGGACTTTACTGATTTGTCTGGTGGCAGGCGCCTGCCTGTTGCTAAAGCAGCCGATACAGCCGCTGTCTTTGCTGATTGG
TAGTGCTTCGTTATTGCTGCTGCTTGATCCGTTGAGTGTGCTGTCGGCGGCATTCTGGCTGTCTTATGGCGCCTGCTTTG
TGCTGTTAAGGATTTACCAGACCCTCCGGCAACAACCGGTGCATCCGCAGCAGACGTTGATGCAGAAATTGTGGCAGGGC
TTCCGGCTGTTATTTGAATCGCAATGGAAAATTTTTATTGCGCTGTTTCCGCTGATGATCATCTTCTTCAAGCAGATTGC
CTGGATTGCGCCGCTGAGTAATCTATTGGCCATTCCCTGGATCGGTCTGGTGATTGTACCGCTGGATATTCTGGCCGGTT
TAAGTTTTTATCTGGCGGAACCGCTGAGCCAGTTGCTGTTTCAGCTCAATGACTTGGCGCTAAGTCTGTTATTGGGTTGT
TTGCAGTTGCTGGATCTGCTGTTTGCACCACAACTGATTCCGGTTGCGCTGAGTCCACCGATGCTGCTGAGTCTGGTGCT
GGGACTGATGATTTTATTTCTTCCCGCAGGTCTAGTGCCTAAAGTCTGGTCAGCGCTGTGTTTATTGCCTTTGCTGTTTC
AGGACCAGTTTTCTCGGCAGGTGGAACTTACTGTGCTGGATGTTGGGCAGGGGCAGGCAATCTTTTTACGCTATCGTGAA
CACAGCATGATGATTGATATGGGCGGTCATTATGATGAACAGAAATGGAGTATCGGCCGGCAGATTATCCAGCCCTTTTT
AAGTGTCAAAGGCGTGCAGCAGTTAGATTATTTATGGTTGACCCATCTGGATCAGGATCATAGCGGTGCTTATCAGACCT
TAAAGCCACAGTTACAGGTGCAACAGGTCTATGCCAATGCTCAGCTTGAAGTAAATCCTCATAGCCATTTTGACTATTGC
CAGCAAGGACAGCAATGGCAGTGGCAGCCGGGCATCCAGATTCAGGTACTCTCTCCGAAACCGGAACAGTTAAATCCTGT
AGAACAGCAGAAAAATGAAAGCTCCTGTGTGCTGCTGGTTGAGTTTGCACAAGCTCAGCCTTACTCACGCTTTTTATTGA
TGGGCGATGCAGGCTGGCCGACTGAATATCAGTTATTACAGGATTATCCGGATTTAAAAGTGGATGTGCTGGTGCTCGGC
CATCATGGTAGCCGGCACAGTTCATCTTACCAGTTTTTAAAACAGCTGGAGCCTAAACTGGCAATTGCATCGGCGGGGCT
GAATAACCGTTATGGGCATCCGAGCACGCAGGTACAAGCCCGACTGAACGCCTTAAAAATTCCGTTATGGCAGACAGCGC
AGCAGGGCAGCATCCAGTTTTATCCCACTGAGAATGAGGTGCTACCGTACCGGCATACGCGGGTTTGGCTGCGGCGCGAT
TAA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (234-515)

• Domain of unknown function (DUF4131) (DUF4131) (25-179)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA/comEC	Acinetobacter baumannii D1279779	48.039	100	0.49
comA/comEC	Acinetobacter baylyi ADP1	48.089	100	0.488
comA/comEC	Acinetobacter baumannii strain A118	47.549	100	0.485