Detailed information
Bioinformatically predicted
Overview
| Name | pilR | Type | Regulator |
| Locus tag | G0029_RS14660 | Genome accession | NZ_CP048670 |
| Coordinates | 3015794..3017221 (+) | Length | 475 a.a. |
| NCBI ID | WP_180109852.1 | Uniprot ID | A0A7S6W5J4 |
| Organism | Acinetobacter sp. YH12138 strain YH12138_T | ||
| Function | regulation of type IV pilus assembly (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3010794..3022221
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G0029_RS14640 (G0029_14625) | thrC | 3011027..3012166 (+) | 1140 | WP_180106773.1 | threonine synthase | - |
| G0029_RS14645 (G0029_14630) | - | 3012289..3013338 (-) | 1050 | WP_143221671.1 | serine hydrolase | - |
| G0029_RS14650 (G0029_14635) | - | 3013551..3014186 (+) | 636 | WP_078189449.1 | response regulator | - |
| G0029_RS14655 (G0029_14640) | pilS | 3014209..3015774 (+) | 1566 | WP_180059122.1 | sensor histidine kinase | Regulator |
| G0029_RS14660 (G0029_14645) | pilR | 3015794..3017221 (+) | 1428 | WP_180109852.1 | sigma-54-dependent transcriptional regulator | Regulator |
| G0029_RS14665 (G0029_14650) | - | 3017244..3018419 (-) | 1176 | WP_180035951.1 | S41 family peptidase | - |
| G0029_RS14670 (G0029_14655) | gpmI | 3018437..3019984 (-) | 1548 | WP_078192590.1 | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | - |
| G0029_RS14675 (G0029_14660) | lptG | 3020107..3021177 (-) | 1071 | WP_180039929.1 | LPS export ABC transporter permease LptG | - |
Sequence
Protein
Download Length: 475 a.a. Molecular weight: 53413.32 Da Isoelectric Point: 5.7582
>NTDB_id=422215 G0029_RS14660 WP_180109852.1 3015794..3017221(+) (pilR) [Acinetobacter sp. YH12138 strain YH12138_T]
MDSQPLVLLVDDEEDLCMLMQMSLSRMGVKTHVAHRLDEAKKALSTYSYDACLTDLNLPDGNGLQLLDWMNEHCPTLPVA
VLTAYGNMDIAIAALKAGAFDFVSKPINPKHLEQLLQKALNKPLAEDITSQDALEHKMLIGESFPIQQLRRTLKKIARSQ
APVFITGESGTGKEVVANLVHRLSNRNEGPFIAINCGAIPTELMESELFGHKKGSFSGATQDKQGLIQSAHGGSLFLDEI
AELPLAMQVKLLRAVQEKRIRPVGSDCEIDVDFRVISASHQDLEALVQQGRFRQDLFFRIHVMDLVLPALRERGDDILLL
AQHFIQKISHEWEIATKPLTERAKSFLLSQYYPGNVRELRNIIERAMTLCDDEQIDLQHLQSAPLRQPSAQFNSYPTMND
SAQLGANSNEQSVVPRKLPEEGLELFLENIEKEVLMNALNLTHWNRTLAAKKLGMSFRSLRYRLKKFGLDTEDEE
MDSQPLVLLVDDEEDLCMLMQMSLSRMGVKTHVAHRLDEAKKALSTYSYDACLTDLNLPDGNGLQLLDWMNEHCPTLPVA
VLTAYGNMDIAIAALKAGAFDFVSKPINPKHLEQLLQKALNKPLAEDITSQDALEHKMLIGESFPIQQLRRTLKKIARSQ
APVFITGESGTGKEVVANLVHRLSNRNEGPFIAINCGAIPTELMESELFGHKKGSFSGATQDKQGLIQSAHGGSLFLDEI
AELPLAMQVKLLRAVQEKRIRPVGSDCEIDVDFRVISASHQDLEALVQQGRFRQDLFFRIHVMDLVLPALRERGDDILLL
AQHFIQKISHEWEIATKPLTERAKSFLLSQYYPGNVRELRNIIERAMTLCDDEQIDLQHLQSAPLRQPSAQFNSYPTMND
SAQLGANSNEQSVVPRKLPEEGLELFLENIEKEVLMNALNLTHWNRTLAAKKLGMSFRSLRYRLKKFGLDTEDEE
Nucleotide
Download Length: 1428 bp
>NTDB_id=422215 G0029_RS14660 WP_180109852.1 3015794..3017221(+) (pilR) [Acinetobacter sp. YH12138 strain YH12138_T]
GTGGATTCACAACCACTGGTATTATTAGTTGATGACGAAGAAGACTTATGTATGCTAATGCAAATGTCTTTATCAAGGAT
GGGGGTTAAAACGCATGTTGCACATCGCCTCGACGAAGCTAAAAAAGCCTTGTCTACCTATAGCTACGATGCCTGCCTAA
CCGATCTCAACTTACCCGATGGTAATGGTCTACAGCTCTTAGATTGGATGAATGAACACTGTCCTACCCTGCCCGTTGCT
GTGCTAACAGCCTATGGCAACATGGACATTGCCATTGCCGCATTAAAGGCGGGAGCATTCGATTTTGTCAGCAAACCGAT
CAATCCCAAACATCTTGAACAACTGCTACAAAAAGCCCTGAATAAGCCTTTGGCCGAAGACATTACTTCGCAAGATGCTT
TAGAACATAAAATGTTGATTGGTGAATCATTTCCAATCCAGCAATTGCGTCGAACCTTAAAGAAAATTGCACGTTCGCAA
GCACCTGTTTTTATTACGGGTGAATCTGGTACGGGTAAAGAGGTCGTGGCCAATCTGGTTCACCGTTTAAGCAACCGTAA
TGAAGGGCCTTTTATTGCCATTAACTGCGGGGCAATTCCCACAGAGTTAATGGAAAGTGAACTTTTTGGCCATAAAAAAG
GCAGCTTTAGTGGTGCCACCCAAGACAAACAAGGTCTGATTCAATCTGCACATGGCGGTAGCTTATTTCTGGATGAAATT
GCCGAATTACCTTTAGCCATGCAAGTTAAACTGCTACGCGCTGTACAGGAAAAACGGATACGTCCTGTGGGTTCAGACTG
TGAAATTGATGTCGACTTCCGTGTGATCAGTGCCAGCCATCAGGACTTAGAAGCACTCGTACAACAAGGTCGCTTCCGCC
AAGACTTATTCTTCCGCATCCATGTGATGGATTTAGTGCTGCCTGCCTTACGTGAACGTGGCGACGATATCCTCTTATTG
GCGCAACATTTTATTCAAAAAATTAGCCATGAATGGGAAATTGCTACCAAGCCTCTAACTGAACGTGCGAAGAGTTTCCT
GCTCAGCCAATATTATCCAGGTAATGTTCGCGAACTCCGCAATATTATCGAACGTGCTATGACCCTCTGCGATGATGAGC
AAATTGATCTTCAACATCTGCAAAGTGCGCCATTAAGACAACCGAGTGCTCAGTTCAATTCCTATCCAACAATGAATGAT
TCTGCTCAGTTGGGTGCAAACAGCAACGAACAGAGTGTGGTCCCTCGCAAACTGCCTGAAGAAGGTTTAGAACTCTTTTT
AGAAAATATCGAAAAAGAAGTGCTCATGAATGCGTTGAATCTCACCCACTGGAACAGAACACTTGCCGCCAAAAAATTAG
GCATGTCATTCCGCTCATTGCGCTATCGTTTGAAAAAATTCGGCTTAGATACCGAAGACGAAGAGTAA
GTGGATTCACAACCACTGGTATTATTAGTTGATGACGAAGAAGACTTATGTATGCTAATGCAAATGTCTTTATCAAGGAT
GGGGGTTAAAACGCATGTTGCACATCGCCTCGACGAAGCTAAAAAAGCCTTGTCTACCTATAGCTACGATGCCTGCCTAA
CCGATCTCAACTTACCCGATGGTAATGGTCTACAGCTCTTAGATTGGATGAATGAACACTGTCCTACCCTGCCCGTTGCT
GTGCTAACAGCCTATGGCAACATGGACATTGCCATTGCCGCATTAAAGGCGGGAGCATTCGATTTTGTCAGCAAACCGAT
CAATCCCAAACATCTTGAACAACTGCTACAAAAAGCCCTGAATAAGCCTTTGGCCGAAGACATTACTTCGCAAGATGCTT
TAGAACATAAAATGTTGATTGGTGAATCATTTCCAATCCAGCAATTGCGTCGAACCTTAAAGAAAATTGCACGTTCGCAA
GCACCTGTTTTTATTACGGGTGAATCTGGTACGGGTAAAGAGGTCGTGGCCAATCTGGTTCACCGTTTAAGCAACCGTAA
TGAAGGGCCTTTTATTGCCATTAACTGCGGGGCAATTCCCACAGAGTTAATGGAAAGTGAACTTTTTGGCCATAAAAAAG
GCAGCTTTAGTGGTGCCACCCAAGACAAACAAGGTCTGATTCAATCTGCACATGGCGGTAGCTTATTTCTGGATGAAATT
GCCGAATTACCTTTAGCCATGCAAGTTAAACTGCTACGCGCTGTACAGGAAAAACGGATACGTCCTGTGGGTTCAGACTG
TGAAATTGATGTCGACTTCCGTGTGATCAGTGCCAGCCATCAGGACTTAGAAGCACTCGTACAACAAGGTCGCTTCCGCC
AAGACTTATTCTTCCGCATCCATGTGATGGATTTAGTGCTGCCTGCCTTACGTGAACGTGGCGACGATATCCTCTTATTG
GCGCAACATTTTATTCAAAAAATTAGCCATGAATGGGAAATTGCTACCAAGCCTCTAACTGAACGTGCGAAGAGTTTCCT
GCTCAGCCAATATTATCCAGGTAATGTTCGCGAACTCCGCAATATTATCGAACGTGCTATGACCCTCTGCGATGATGAGC
AAATTGATCTTCAACATCTGCAAAGTGCGCCATTAAGACAACCGAGTGCTCAGTTCAATTCCTATCCAACAATGAATGAT
TCTGCTCAGTTGGGTGCAAACAGCAACGAACAGAGTGTGGTCCCTCGCAAACTGCCTGAAGAAGGTTTAGAACTCTTTTT
AGAAAATATCGAAAAAGAAGTGCTCATGAATGCGTTGAATCTCACCCACTGGAACAGAACACTTGCCGCCAAAAAATTAG
GCATGTCATTCCGCTCATTGCGCTATCGTTTGAAAAAATTCGGCTTAGATACCGAAGACGAAGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilR | Acinetobacter baumannii strain A118 |
73.629 |
99.789 |
0.735 |
| pilR | Pseudomonas aeruginosa PAK |
48.718 |
98.526 |
0.48 |