Detailed information NTG0422177

Bioinformatically predicted

Overview

• Name: comE
• Type: Machinery gene
• Locus tag: G0028_RS17155
• Genome accession: NZ_CP048659
• Coordinates: 3464774..3465208 (-)
• Length: 144 a.a.
• NCBI ID: WP_180047655.1
• Uniprot ID: -
• Organism: Acinetobacter piscicola strain YH12207_T
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3459774..3470208

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G0028_RS17115 (G0028_17085)	rplS	3460098..3460469 (-)	372	WP_174493840.1	50S ribosomal protein L19	-
G0028_RS17120 (G0028_17090)	trmD	3460642..3461391 (-)	750	WP_180046332.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
G0028_RS17125 (G0028_17095)	rimM	3461433..3461981 (-)	549	WP_174493842.1	ribosome maturation factor RimM	-
G0028_RS17130 (G0028_17100)	rpsP	3462010..3462267 (-)	258	WP_004826436.1	30S ribosomal protein S16	-
G0028_RS17135 (G0028_17105)	-	3462414..3462803 (-)	390	WP_218946327.1	type IV pilin protein	-
G0028_RS17140 (G0028_17110)	comE	3462839..3463267 (-)	429	WP_227554747.1	type IV pilin protein	Machinery gene
G0028_RS17145 (G0028_17115)	-	3463315..3464262 (+)	948	WP_180048122.1	IS30 family transposase	-
G0028_RS17150 (G0028_17120)	-	3464284..3464793 (-)	510	WP_218946376.1	type IV pilin protein	-
G0028_RS17155 (G0028_17125)	comE	3464774..3465208 (-)	435	WP_180047655.1	type IV pilin protein	Machinery gene
G0028_RS17160 (G0028_17130)	-	3465216..3468878 (-)	3663	WP_218946377.1	pilus assembly protein	-
G0028_RS17165 (G0028_17135)	-	3468932..3469741 (-)	810	WP_180047653.1	pilus assembly protein	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 16089.51 Da
• Isoelectric Point: 8.4212

>NTDB_id=422177 G0028_RS17155 WP_180047655.1 3464774..3465208(-) (comE) [Acinetobacter piscicola strain YH12207_T]
MNLKNGFTLIELMIVVVMIAVLAAIAYPSYQQYILRSNASLAEAEMQRIAQDLERYKSRNFSYRLYTPISINVGDPLKYT
ITVQATATTNLATDGSAWVMKAVPQDVKNFTYLFNNQGLRCKNKVASKVTFTDCGAIADGSEDW

Nucleotide

• Length: 435 bp

>NTDB_id=422177 G0028_RS17155 WP_180047655.1 3464774..3465208(-) (comE) [Acinetobacter piscicola strain YH12207_T]
ATGAATTTAAAAAATGGTTTTACACTTATTGAGTTGATGATTGTGGTCGTTATGATTGCAGTACTTGCTGCAATTGCTTA
CCCAAGTTATCAGCAATACATACTCAGAAGCAATGCTTCATTGGCTGAGGCGGAAATGCAACGCATAGCCCAGGATTTGG
AACGTTATAAATCTAGAAATTTTAGCTACAGATTGTATACCCCTATTTCAATAAATGTTGGAGATCCACTTAAATATACA
ATTACTGTTCAAGCAACAGCGACCACCAATTTAGCCACAGATGGTTCTGCATGGGTAATGAAAGCTGTTCCACAAGATGT
GAAAAATTTCACATATTTATTTAATAATCAGGGGCTTAGGTGTAAAAATAAGGTGGCGTCTAAAGTAACATTTACAGATT
GTGGGGCAATAGCAGATGGAAGTGAAGATTGGTAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (1-27)

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (28-107)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comE	Acinetobacter baylyi ADP1	44.643	100	0.521
pilY2	Acinetobacter baumannii D1279779	40.26	100	0.431
pilE	Acinetobacter baumannii D1279779	37.671	100	0.382
comF	Acinetobacter baylyi ADP1	37.681	95.833	0.361