Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   G0028_RS04685 Genome accession   NZ_CP048659
Coordinates   970925..971302 (+) Length   125 a.a.
NCBI ID   WP_130073892.1    Uniprot ID   -
Organism   Acinetobacter piscicola strain YH12207_T     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 965925..976302
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G0028_RS04670 (G0028_04660) - 966693..968039 (+) 1347 WP_227554771.1 hypothetical protein -
  G0028_RS04675 (G0028_04665) - 968103..969818 (-) 1716 WP_180046719.1 proline--tRNA ligase -
  G0028_RS04680 (G0028_04670) - 969999..970643 (-) 645 WP_227554772.1 hypothetical protein -
  G0028_RS04685 (G0028_04675) pilG 970925..971302 (+) 378 WP_130073892.1 twitching motility response regulator PilG Regulator
  G0028_RS04690 (G0028_04680) - 971329..971697 (+) 369 WP_130073891.1 response regulator -
  G0028_RS04695 (G0028_04685) - 971700..972233 (+) 534 WP_130073890.1 chemotaxis protein CheW -
  G0028_RS04700 (G0028_04690) - 972283..974355 (+) 2073 WP_180046716.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 125 a.a.        Molecular weight: 14042.20 Da        Isoelectric Point: 4.9264

>NTDB_id=422162 G0028_RS04685 WP_130073892.1 970925..971302(+) (pilG) [Acinetobacter piscicola strain YH12207_T]
MEEKFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIADANPDIVFVDIMMPRLDGYQTCALIKNSQSYQ
NIPVIMLSSKDGLFDQAKGKVVGSDEYLTKPFSKDELLNAIRKHV

Nucleotide


Download         Length: 378 bp        

>NTDB_id=422162 G0028_RS04685 WP_130073892.1 970925..971302(+) (pilG) [Acinetobacter piscicola strain YH12207_T]
ATGGAAGAAAAATTCCAAAATTTAAAAGTCATGGTTATCGATGATTCTAAAACGATTCGTCGAACGGCTGAAACACTATT
GCAGCGTGAAGGGTGTGAAGTCATCACTGCAGTAGATGGGTTTGAAGCACTTTCAAAAATTGCTGATGCGAATCCTGATA
TTGTTTTTGTTGATATTATGATGCCTCGATTAGATGGTTACCAAACTTGTGCTCTCATTAAAAATTCTCAGAGTTATCAA
AATATTCCTGTGATTATGCTGTCAAGTAAAGACGGTTTATTTGACCAAGCAAAAGGAAAGGTCGTAGGATCGGATGAGTA
TTTAACTAAACCATTTAGTAAAGATGAATTATTAAATGCTATTCGGAAACATGTTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

95.2

100

0.952
  vicR Streptococcus mutans UA159

41.88

93.6

0.392
  pilH Synechocystis sp. PCC 6803

41.228

91.2

0.376

Multiple sequence alignment