Detailed information
Bioinformatically predicted
Overview
| Name | pilR | Type | Regulator |
| Locus tag | G0028_RS01845 | Genome accession | NZ_CP048659 |
| Coordinates | 390399..391808 (-) | Length | 469 a.a. |
| NCBI ID | WP_180044937.1 | Uniprot ID | - |
| Organism | Acinetobacter piscicola strain YH12207_T | ||
| Function | regulation of type IV pilus assembly (predicted from homology) Competence regulation |
||
Genomic Context
Location: 385399..396808
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G0028_RS01830 (G0028_01830) | lptG | 386270..387340 (+) | 1071 | WP_180044940.1 | LPS export ABC transporter permease LptG | - |
| G0028_RS01835 (G0028_01835) | gpmI | 387465..389012 (+) | 1548 | WP_180044939.1 | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | - |
| G0028_RS01840 (G0028_01840) | - | 389031..390206 (+) | 1176 | WP_180044938.1 | S41 family peptidase | - |
| G0028_RS01845 (G0028_01845) | pilR | 390399..391808 (-) | 1410 | WP_180044937.1 | sigma-54-dependent transcriptional regulator | Regulator |
| G0028_RS01850 (G0028_01850) | pilS | 391826..393400 (-) | 1575 | WP_130074532.1 | sensor histidine kinase | Regulator |
| G0028_RS01855 (G0028_01855) | - | 393423..394058 (-) | 636 | WP_130074492.1 | response regulator | - |
| G0028_RS01860 (G0028_01860) | - | 394290..395354 (+) | 1065 | WP_130074493.1 | D-alanyl-D-alanine endopeptidase | - |
| G0028_RS01865 (G0028_01865) | thrC | 395472..396611 (-) | 1140 | WP_107008527.1 | threonine synthase | - |
Sequence
Protein
Download Length: 469 a.a. Molecular weight: 53184.98 Da Isoelectric Point: 6.6689
>NTDB_id=422151 G0028_RS01845 WP_180044937.1 390399..391808(-) (pilR) [Acinetobacter piscicola strain YH12207_T]
MTTRQPLVLLVDDEHDLCVLMQMTLARMGIKTHIAHHLQQAKLFFSEHNYNACITDLNLPDGSGLELVKHVTQHYPKVPI
AVLTAYGNMEIAIASLKAGAFDFVNKPINQQHLHQLLTKALHVPLIDYSEENLQLEHQLLIGESKPMLKLKETLKKVARS
QAPVFISGESGTGKEVVANLIHKLSNRSDSPFVVINCGAISEELIDRELFGYVSHSFAGATQDKLGLIQSANGGCLFLDE
IAELSLNTQTKLLRALQEKKIRPLGSEQEIDVDFRIISATNQNLEERVQQGKFRQDLFFRIHVMDLHLAPLRERGKDILI
LAEHFIHNICLEWDIANKELSEEGKRFLQSQPFLGNVRELRNMIERAITLSDGHLICIEHLQYSQKRNFNVEKSDTGISY
ENSTNSQEASGKIPTEGLEQYLEKVEKEVLLNALNQTHWNRTLAAKKLGMTFRSLRYRLKKFGLDSDDD
MTTRQPLVLLVDDEHDLCVLMQMTLARMGIKTHIAHHLQQAKLFFSEHNYNACITDLNLPDGSGLELVKHVTQHYPKVPI
AVLTAYGNMEIAIASLKAGAFDFVNKPINQQHLHQLLTKALHVPLIDYSEENLQLEHQLLIGESKPMLKLKETLKKVARS
QAPVFISGESGTGKEVVANLIHKLSNRSDSPFVVINCGAISEELIDRELFGYVSHSFAGATQDKLGLIQSANGGCLFLDE
IAELSLNTQTKLLRALQEKKIRPLGSEQEIDVDFRIISATNQNLEERVQQGKFRQDLFFRIHVMDLHLAPLRERGKDILI
LAEHFIHNICLEWDIANKELSEEGKRFLQSQPFLGNVRELRNMIERAITLSDGHLICIEHLQYSQKRNFNVEKSDTGISY
ENSTNSQEASGKIPTEGLEQYLEKVEKEVLLNALNQTHWNRTLAAKKLGMTFRSLRYRLKKFGLDSDDD
Nucleotide
Download Length: 1410 bp
>NTDB_id=422151 G0028_RS01845 WP_180044937.1 390399..391808(-) (pilR) [Acinetobacter piscicola strain YH12207_T]
ATGACCACACGACAACCATTAGTTCTACTTGTGGATGATGAGCACGATTTATGTGTACTCATGCAAATGACATTAGCGCG
CATGGGCATCAAAACCCATATTGCACATCATCTACAGCAAGCCAAGTTGTTCTTTAGTGAGCACAACTACAATGCCTGTA
TTACCGATTTAAACCTACCTGATGGAAGTGGTTTAGAGTTGGTTAAGCACGTGACACAGCATTATCCAAAAGTACCCATT
GCGGTACTCACAGCCTATGGCAATATGGAAATTGCAATCGCCTCACTCAAAGCAGGTGCATTTGATTTCGTGAATAAACC
AATTAATCAACAGCATTTACACCAACTGCTCACCAAAGCCTTGCACGTGCCTTTAATCGATTATAGTGAGGAAAATCTGC
AACTAGAGCATCAACTTCTCATTGGCGAATCTAAGCCCATGTTAAAGTTGAAGGAAACCCTTAAAAAAGTCGCTCGCTCA
CAAGCCCCTGTTTTTATTTCAGGTGAATCAGGCACAGGCAAAGAAGTCGTTGCAAATTTGATTCATAAACTGAGTAATCG
CAGTGATAGCCCATTTGTGGTCATTAACTGTGGTGCTATTTCTGAAGAACTCATCGACCGAGAACTTTTTGGCTACGTCA
GTCATAGTTTTGCAGGAGCAACCCAAGATAAACTGGGGTTAATTCAATCGGCTAATGGGGGGTGTCTATTTTTAGATGAA
ATTGCGGAACTATCCTTAAATACACAGACCAAACTATTACGCGCCTTACAAGAAAAGAAAATTCGTCCACTAGGCAGCGA
ACAAGAAATCGATGTAGATTTTCGCATCATCAGCGCAACCAATCAAAATCTTGAAGAACGCGTGCAACAAGGTAAATTTA
GACAAGATCTATTTTTCCGTATCCATGTCATGGACTTACACTTAGCTCCCCTGCGTGAAAGGGGCAAAGATATTCTCATT
TTAGCAGAACATTTTATACACAATATCTGTTTGGAATGGGATATTGCCAATAAAGAACTGTCTGAAGAGGGCAAACGCTT
TTTACAATCGCAACCCTTTTTAGGCAATGTTCGTGAATTACGCAATATGATTGAACGTGCAATTACCTTAAGTGATGGGC
ACCTGATCTGTATTGAGCATTTGCAATATTCACAGAAACGTAATTTTAATGTGGAAAAATCAGATACGGGCATCAGTTAT
GAAAACTCAACAAATTCACAAGAAGCGTCTGGGAAGATCCCCACTGAAGGCTTAGAACAATACTTAGAAAAAGTGGAAAA
AGAAGTGTTATTAAATGCTTTAAATCAAACCCATTGGAACAGAACCTTAGCCGCCAAAAAACTCGGTATGACATTCCGTT
CTTTGCGCTATCGCTTGAAAAAGTTTGGCTTAGACAGTGATGATGATTAA
ATGACCACACGACAACCATTAGTTCTACTTGTGGATGATGAGCACGATTTATGTGTACTCATGCAAATGACATTAGCGCG
CATGGGCATCAAAACCCATATTGCACATCATCTACAGCAAGCCAAGTTGTTCTTTAGTGAGCACAACTACAATGCCTGTA
TTACCGATTTAAACCTACCTGATGGAAGTGGTTTAGAGTTGGTTAAGCACGTGACACAGCATTATCCAAAAGTACCCATT
GCGGTACTCACAGCCTATGGCAATATGGAAATTGCAATCGCCTCACTCAAAGCAGGTGCATTTGATTTCGTGAATAAACC
AATTAATCAACAGCATTTACACCAACTGCTCACCAAAGCCTTGCACGTGCCTTTAATCGATTATAGTGAGGAAAATCTGC
AACTAGAGCATCAACTTCTCATTGGCGAATCTAAGCCCATGTTAAAGTTGAAGGAAACCCTTAAAAAAGTCGCTCGCTCA
CAAGCCCCTGTTTTTATTTCAGGTGAATCAGGCACAGGCAAAGAAGTCGTTGCAAATTTGATTCATAAACTGAGTAATCG
CAGTGATAGCCCATTTGTGGTCATTAACTGTGGTGCTATTTCTGAAGAACTCATCGACCGAGAACTTTTTGGCTACGTCA
GTCATAGTTTTGCAGGAGCAACCCAAGATAAACTGGGGTTAATTCAATCGGCTAATGGGGGGTGTCTATTTTTAGATGAA
ATTGCGGAACTATCCTTAAATACACAGACCAAACTATTACGCGCCTTACAAGAAAAGAAAATTCGTCCACTAGGCAGCGA
ACAAGAAATCGATGTAGATTTTCGCATCATCAGCGCAACCAATCAAAATCTTGAAGAACGCGTGCAACAAGGTAAATTTA
GACAAGATCTATTTTTCCGTATCCATGTCATGGACTTACACTTAGCTCCCCTGCGTGAAAGGGGCAAAGATATTCTCATT
TTAGCAGAACATTTTATACACAATATCTGTTTGGAATGGGATATTGCCAATAAAGAACTGTCTGAAGAGGGCAAACGCTT
TTTACAATCGCAACCCTTTTTAGGCAATGTTCGTGAATTACGCAATATGATTGAACGTGCAATTACCTTAAGTGATGGGC
ACCTGATCTGTATTGAGCATTTGCAATATTCACAGAAACGTAATTTTAATGTGGAAAAATCAGATACGGGCATCAGTTAT
GAAAACTCAACAAATTCACAAGAAGCGTCTGGGAAGATCCCCACTGAAGGCTTAGAACAATACTTAGAAAAAGTGGAAAA
AGAAGTGTTATTAAATGCTTTAAATCAAACCCATTGGAACAGAACCTTAGCCGCCAAAAAACTCGGTATGACATTCCGTT
CTTTGCGCTATCGCTTGAAAAAGTTTGGCTTAGACAGTGATGATGATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilR | Acinetobacter baumannii strain A118 |
65.745 |
100 |
0.659 |
| pilR | Pseudomonas aeruginosa PAK |
44.978 |
97.655 |
0.439 |