Detailed information NTG0422090

Bioinformatically predicted

Overview

• Name: uvrB
• Type: Machinery gene
• Locus tag: ICN52_RS05500
• Genome accession: NZ_CP061537
• Coordinates: 1090351..1092324 (+)
• Length: 657 a.a.
• NCBI ID: WP_002784244.1
• Uniprot ID: -
• Organism: Campylobacter coli strain PSU-32
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1085351..1097324

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ICN52_RS05470 (ICN52_05470)	flgH	1085539..1086237 (+)	699	WP_002793310.1	flagellar basal body L-ring protein FlgH	-
ICN52_RS05475 (ICN52_05475)	ispG	1086321..1087394 (-)	1074	WP_002776443.1	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	-
ICN52_RS05480 (ICN52_05480)	-	1087454..1089292 (-)	1839	WP_002787399.1	primosomal protein N'	-
ICN52_RS05485 (ICN52_05485)	Cj0683	1089289..1089735 (-)	447	WP_002776437.1	type II secretion system protein	Machinery gene
ICN52_RS05490 (ICN52_05490)	-	1089732..1089977 (-)	246	WP_002776428.1	hypothetical protein	-
ICN52_RS05495 (ICN52_05495)	-	1089967..1090197 (-)	231	WP_002776426.1	hypothetical protein	-
ICN52_RS05500 (ICN52_05500)	uvrB	1090351..1092324 (+)	1974	WP_002784244.1	excinuclease ABC subunit UvrB	Machinery gene
ICN52_RS05505 (ICN52_05505)	-	1092359..1093783 (-)	1425	WP_002776421.1	anaerobic C4-dicarboxylate transporter	-
ICN52_RS05510 (ICN52_05510)	-	1093971..1095221 (-)	1251	WP_002781614.1	RNA polymerase factor sigma-54	-
ICN52_RS05515 (ICN52_05515)	lptB	1095221..1095949 (-)	729	WP_002776419.1	LPS export ABC transporter ATP-binding protein	-
ICN52_RS05520 (ICN52_05520)	tsaE	1095942..1096349 (-)	408	WP_002776418.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	-
ICN52_RS05525 (ICN52_05525)	-	1096346..1096591 (-)	246	WP_002776417.1	RNA-binding S4 domain-containing protein	-

Sequence

Protein

• Length: 657 a.a.
• Molecular weight: 76054.45 Da
• Isoelectric Point: 6.3996

>NTDB_id=422090 ICN52_RS05500 WP_002784244.1 1090351..1092324(+) (uvrB) [Campylobacter coli strain PSU-32]
MLELTSDFKPSPDQEQAIQGIVKSIKKGNKYQTLLGVTGSGKTFTMANVIKELNMPTLIMSHNKSLCAQLYSEFKGFFSK
NHVEYFISYYDYYQPEAYIPRTDVFIEKDSSTNEDLERLRLSATASLLSYEDVVCIASVSANYGLGNPNEYIGMVLIFEL
DMQISQKELLKKLVDMGYKRNDNFFDRADFRVQGDIIDIYPAYYEDEVVRLEFFGDELDAMYHYNVLENKKVKDLKRFIL
YPTSQFSVGETRLKQAIKDIKAELNERLAYFEHENKLVEYQRLKQRVEFDLEMLTSTGMCKGVENYARHLTGLKEGDTPY
TLFDYFAIKNRKFLVIVDESHVSLPQFRGMFAGDRSRKQTLVDYGFRLPSALDNRPLMFDEFIHKDCQFLFVSATPAPLE
LELSKENIFHQIMRPTGLLDPLIELKDSDNQVEILFDEAKKVIQRNERVLVTVLTKKLAEELTRYYLELGIKVKYMHSDI
DAIERNEIIRGLRSGAFDMLIGINLLREGLDLPEVSLIAIMDADKEGFLRSTTSLIQTMGRAARNVNGKVLLFCKKITKS
MQEAMDTTNERRKLQEAYNQKHNITPTSVKRHIEESLKNEENLGEIYRKGKKFEKMPANERAKIVKELHKQMLEAAKALE
FEKAATLRDEINKLKDL

Nucleotide

• Length: 1974 bp

>NTDB_id=422090 ICN52_RS05500 WP_002784244.1 1090351..1092324(+) (uvrB) [Campylobacter coli strain PSU-32]
ATGTTAGAACTTACAAGCGATTTTAAACCAAGTCCTGATCAAGAACAAGCAATACAAGGTATTGTCAAAAGCATAAAAAA
AGGTAATAAATATCAAACCCTACTCGGCGTAACAGGAAGCGGAAAGACTTTTACCATGGCAAATGTCATAAAAGAACTCA
ATATGCCAACCCTTATCATGAGTCATAACAAAAGCCTTTGCGCCCAGCTTTATAGCGAATTTAAAGGTTTTTTTTCTAAG
AACCATGTGGAATATTTTATTTCTTATTATGATTATTATCAGCCTGAAGCTTATATACCGCGCACCGATGTTTTTATAGA
AAAAGATAGCTCCACAAATGAGGATCTAGAACGCTTAAGACTTAGCGCAACTGCTTCGCTTTTAAGCTATGAGGATGTGG
TTTGTATCGCTAGTGTCTCGGCTAATTATGGACTTGGAAATCCAAATGAATACATAGGAATGGTTTTAATCTTTGAACTA
GACATGCAAATTTCACAAAAAGAACTTTTAAAGAAACTTGTAGACATGGGTTATAAAAGAAATGATAATTTCTTTGATCG
TGCTGATTTTCGCGTACAAGGTGATATTATAGACATTTATCCAGCTTATTATGAAGATGAAGTAGTAAGACTTGAATTTT
TTGGCGATGAGCTTGATGCTATGTATCATTACAATGTTTTAGAAAATAAAAAAGTCAAAGATTTAAAACGCTTCATACTC
TATCCTACAAGCCAGTTTAGTGTAGGTGAAACAAGACTAAAACAAGCGATAAAAGACATAAAAGCAGAACTTAACGAACG
CCTTGCTTATTTTGAACATGAAAATAAACTCGTAGAATATCAACGCCTTAAACAAAGGGTTGAATTTGATCTTGAAATGC
TTACAAGCACAGGAATGTGTAAAGGCGTTGAAAATTATGCAAGACATTTAACAGGGCTTAAAGAAGGTGATACTCCTTAT
ACGCTTTTTGATTATTTTGCGATTAAAAATAGGAAATTTCTTGTTATAGTCGATGAAAGCCATGTTTCTTTACCACAATT
TAGAGGTATGTTTGCAGGAGATAGAAGCAGAAAACAAACCTTGGTAGATTATGGTTTTCGTCTTCCATCAGCTCTTGATA
ATCGTCCTTTAATGTTTGATGAATTTATCCATAAAGATTGTCAGTTTCTTTTTGTTTCAGCCACCCCTGCCCCGCTTGAG
CTTGAACTTAGCAAGGAAAATATCTTTCATCAAATTATGCGTCCAACAGGATTACTTGATCCTTTGATAGAACTTAAAGA
TAGCGATAATCAAGTTGAAATTTTATTTGATGAAGCCAAAAAAGTTATACAAAGAAACGAACGCGTTTTAGTTACTGTGT
TGACTAAAAAACTAGCTGAAGAGCTTACAAGGTATTATTTAGAACTTGGTATTAAAGTAAAATACATGCATTCAGATATT
GATGCAATAGAACGCAATGAAATCATAAGAGGCTTAAGAAGCGGTGCTTTTGATATGTTAATAGGTATAAATTTACTTAG
AGAAGGACTTGATTTGCCTGAGGTTTCGCTTATTGCCATTATGGACGCAGATAAGGAGGGTTTTTTAAGAAGCACTACAA
GTTTAATCCAAACCATGGGAAGAGCTGCTAGAAATGTCAATGGTAAAGTTTTACTCTTTTGCAAAAAGATTACAAAATCC
ATGCAAGAAGCTATGGATACTACAAATGAGCGTCGCAAACTTCAAGAAGCTTACAATCAAAAACATAACATCACCCCAAC
TTCAGTCAAGCGACACATCGAAGAAAGTTTAAAAAATGAAGAAAACTTAGGAGAAATTTATCGCAAAGGTAAAAAATTTG
AAAAAATGCCTGCTAATGAAAGAGCTAAAATCGTAAAAGAGCTTCATAAACAAATGCTTGAAGCTGCTAAAGCGCTCGAA
TTTGAAAAAGCAGCGACTTTAAGAGATGAGATCAATAAATTAAAAGATTTATAG

Domains

Predicted by InterProScan.

• Ultra-violet resistance protein B (UvrB) (552-593)

• Type III restriction enzyme, res subunit (ResIII) (8-116)

• UvrB/uvrC motif (UVR) (623-656)

• UvrB interaction domain (UvrB_inter) (158-246)

• Helicase conserved C-terminal domain (Helicase_C) (439-544)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrB	Streptococcus pneumoniae R6	50.305	99.848	0.502
uvrB	Streptococcus pneumoniae TIGR4	50.305	99.848	0.502
uvrB	Streptococcus pneumoniae D39	50.305	99.848	0.502