Detailed information NTG0421710

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: G3M67_RS03160
• Genome accession: NZ_CP048601
• Coordinates: 670309..671109 (+)
• Length: 266 a.a.
• NCBI ID: WP_163524542.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain GCT 27
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 665309..676109

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G3M67_RS03125 (G3M67_03125)	pseH	665809..666351 (+)	543	WP_079336468.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
G3M67_RS03130 (G3M67_03130)	-	666284..667222 (-)	939	WP_163524538.1	tetraacyldisaccharide 4'-kinase	-
G3M67_RS03135 (G3M67_03135)	-	667219..668001 (-)	783	WP_163524539.1	NAD+ synthase	-
G3M67_RS03145 (G3M67_03145)	ilvC	668250..669242 (+)	993	WP_163524541.1	ketol-acid reductoisomerase	-
G3M67_RS03150 (G3M67_03150)	minD	669266..670072 (+)	807	WP_001019055.1	septum site-determining protein MinD	-
G3M67_RS03155 (G3M67_03155)	minE	670069..670302 (+)	234	WP_000051414.1	cell division topological specificity factor MinE	-
G3M67_RS03160 (G3M67_03160)	dprA	670309..671109 (+)	801	WP_163524542.1	DNA-processing protein DprA	Machinery gene
G3M67_RS03165 (G3M67_03165)	dprB	671106..671510 (+)	405	WP_163524544.1	Holliday junction resolvase RuvX	Machinery gene
G3M67_RS03170 (G3M67_03170)	-	671797..672341 (+)	545	Protein_643	tetratricopeptide repeat protein	-
G3M67_RS03175 (G3M67_03175)	-	672469..672807 (+)	339	WP_021176524.1	hypothetical protein	-
G3M67_RS03180 (G3M67_03180)	-	672791..673351 (+)	561	WP_163524546.1	hypothetical protein	-
G3M67_RS03185 (G3M67_03185)	-	673596..674477 (-)	882	WP_163524548.1	RluA family pseudouridine synthase	-
G3M67_RS03190 (G3M67_03190)	recJ	674477..676027 (-)	1551	WP_163524550.1	single-stranded-DNA-specific exonuclease RecJ	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29841.74 Da
• Isoelectric Point: 8.5952

>NTDB_id=421710 G3M67_RS03160 WP_163524542.1 670309..671109(+) (dprA) [Helicobacter pylori strain GCT 27]
MKSHFQYSALENIPKAFDILKDPPKKLYCVGDTKLLESPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKDFMPIKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDHHLKEMPEMKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRVNHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=421710 G3M67_RS03160 WP_163524542.1 670309..671109(+) (dprA) [Helicobacter pylori strain GCT 27]
ATGAAAAGCCATTTCCAATACAGCGCGCTAGAAAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAACT
CTATTGTGTGGGCGATACAAAGCTTTTAGAATCGCCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTACA
GCAAGCAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGGGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCTTTGCCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTTATCTATCCTACGAA
CAACCATAAAGTGATTCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTCATGCCCATTAAAG
GCTCTTTTTTAGCCAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTGATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGCGCGAGATTAGCCCAAAAATACCAAAAACCCTTATTCGTTTTACCCCAGCGCTTAAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACC
ACCATTTAAAAGAAATGCCTGAAATGAAAGATGAATTTTTAGAATATTGCGCCAAAAACCCGAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGATAAGCTTTTAGAATACGAGCTGTTGGGTAAGATCAAGCGCGTCAATCATATTGTGGTGTTAGCATG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	97.368	100	0.974
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.673	84.962	0.414