Detailed information NTG0419451

Bioinformatically predicted

Overview

• Name: comE
• Type: Machinery gene
• Locus tag: GVU25_RS11510
• Genome accession: NZ_CP048014
• Coordinates: 2393405..2393905 (-)
• Length: 166 a.a.
• NCBI ID: WP_167846358.1
• Uniprot ID: -
• Organism: Acinetobacter towneri strain 205
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IS/Tn	2394493..2395467	2393405..2393905	flank	588

Gene organization within MGE regions

Location: 2393405..2395467

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GVU25_RS11510 (GVU25_11465)	comE	2393405..2393905 (-)	501	WP_167846358.1	type IV pilin protein	Machinery gene
GVU25_RS13890 (GVU25_11470)	-	2394020..2394115 (-)	96	WP_225530219.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	-
GVU25_RS11520 (GVU25_11475)	-	2394115..2394402 (-)	288	WP_225530218.1	hypothetical protein	-

Sequence

Protein

• Length: 166 a.a.
• Molecular weight: 18346.36 Da
• Isoelectric Point: 9.7161

>NTDB_id=419451 GVU25_RS11510 WP_167846358.1 2393405..2393905(-) (comE) [Acinetobacter towneri strain 205]
MRKSSGFTLIELMVVVVIIAILAAIAIPSYQSFIRKNLTAQVQQEMLKLADQLERHKAKNFSYKKFDPKYLYAGTVAMPE
VFVPGGIFNVATSKYKIELKDISRTTTENLLTTDNGMVWSMKATPLDLSDGKLYTLLLTSTGVRCKSTASSNVSYSACTG
SGVEQW

Nucleotide

• Length: 501 bp

>NTDB_id=419451 GVU25_RS11510 WP_167846358.1 2393405..2393905(-) (comE) [Acinetobacter towneri strain 205]
ATGCGTAAATCATCTGGATTTACTCTAATTGAGTTAATGGTTGTCGTGGTGATTATTGCGATTTTAGCTGCGATAGCAAT
ACCAAGCTATCAAAGCTTTATTCGCAAAAATCTAACGGCCCAAGTTCAGCAAGAAATGTTGAAATTAGCTGATCAATTAG
AGAGACATAAAGCTAAAAATTTCTCTTATAAAAAATTTGATCCTAAATATTTATATGCGGGGACTGTCGCTATGCCTGAA
GTATTTGTACCAGGAGGGATATTTAATGTAGCTACATCCAAATATAAAATTGAGTTAAAAGATATTAGCCGCACGACTAC
TGAAAACTTACTGACCACAGACAATGGAATGGTTTGGTCAATGAAAGCGACTCCATTAGATTTATCAGACGGAAAGCTAT
ATACATTATTGTTAACAAGTACGGGAGTTCGTTGTAAATCCACGGCGAGTTCAAATGTGTCTTATAGTGCTTGTACTGGA
AGTGGAGTAGAACAATGGTAA

Domains

Predicted by InterproScan.

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (28-125)

• Prokaryotic N-terminal methylation motif (N_methyl) (1-26)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comE	Acinetobacter baylyi ADP1	49.711	100	0.518
pilY2	Acinetobacter baumannii D1279779	37.888	96.988	0.367