Detailed information NTG0419424

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: GVU25_RS00965
• Genome accession: NZ_CP048014
• Coordinates: 218479..219912 (-)
• Length: 477 a.a.
• NCBI ID: WP_167845704.1
• Uniprot ID: -
• Organism: Acinetobacter towneri strain 205
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 213479..224912

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GVU25_RS00950 (GVU25_00950)	lptG	214478..215548 (+)	1071	WP_004975683.1	LPS export ABC transporter permease LptG	-
GVU25_RS00955 (GVU25_00955)	gpmI	215694..217241 (+)	1548	WP_104852912.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
GVU25_RS00960 (GVU25_00960)	-	217266..218429 (+)	1164	WP_004975690.1	S41 family peptidase	-
GVU25_RS00965 (GVU25_00965)	pilR	218479..219912 (-)	1434	WP_167845704.1	sigma-54-dependent transcriptional regulator	Regulator
GVU25_RS00970 (GVU25_00970)	pilS	219982..221544 (-)	1563	WP_167845705.1	sensor histidine kinase	Regulator
GVU25_RS00975 (GVU25_00975)	-	221585..222220 (-)	636	WP_004975702.1	response regulator	-
GVU25_RS00980 (GVU25_00980)	-	222436..223527 (+)	1092	WP_131260992.1	serine hydrolase	-
GVU25_RS00985 (GVU25_00985)	thrC	223648..224787 (-)	1140	WP_004975706.1	threonine synthase	-

Sequence

Protein

• Length: 477 a.a.
• Molecular weight: 53713.61 Da
• Isoelectric Point: 5.8670

>NTDB_id=419424 GVU25_RS00965 WP_167845704.1 218479..219912(-) (pilR) [Acinetobacter towneri strain 205]
MHAVQPLVLLVDDEEDLCTLMQMTLARMGIQTHVAYRLAQAKQLLAEHQYDACLTDLNLPDGNGLQLVEWISEQYPNVPV
AVLTAYGNMDIAIAALKAGAFDFVSKPVNQIHLQQLLEKALNKPFDTTDHHSQDQLEYKMLIGQSLPIQQLRSTIKKIAR
SQAPVFITGESGTGKEVVANLVHRLSNRNEGPFIAINCGAIPTELMESELFGHKKGSFTGATQDKQGLIQSAHGGSLFLD
EIAELPLSMQVKLLRAVQEKRIRPVGSDSEIDVDFRVISASHQDLESLVQQGRFRQDLFFRIHVMDLVLPALRERGQDIL
LLADHFIQKVAQEWDIPAKQLTPRAQQFLLEQYYPGNVRELRNIIERAITLSDDDVIDLKHLQTAPLRQFSMSNTATTEP
QPTAETPQQIVTDVLLTGRKLPEEGLEAYLEKVEKDILLNALHLTHWNRTLAAKKLGMSFRSLRYRLKKFGLDTEDE

Nucleotide

• Length: 1434 bp

>NTDB_id=419424 GVU25_RS00965 WP_167845704.1 218479..219912(-) (pilR) [Acinetobacter towneri strain 205]
ATGCACGCTGTTCAACCTTTGGTTTTATTGGTCGATGACGAAGAAGACCTTTGTACCCTCATGCAGATGACTTTGGCACG
TATGGGGATTCAAACCCATGTCGCGTATCGTTTAGCACAAGCCAAGCAATTATTGGCAGAACATCAGTACGATGCTTGCT
TAACCGACTTAAACCTGCCCGATGGCAATGGCTTGCAACTGGTTGAATGGATTTCCGAACAATATCCGAATGTGCCTGTT
GCCGTATTGACCGCTTACGGCAATATGGATATTGCGATTGCTGCTTTAAAAGCAGGTGCATTTGACTTTGTCAGCAAGCC
TGTCAATCAAATACATTTACAGCAACTCCTTGAAAAAGCACTGAATAAACCTTTCGACACCACCGATCATCACAGCCAAG
ATCAGCTTGAATATAAAATGTTGATTGGGCAATCTTTGCCTATTCAGCAATTGCGCAGCACCATCAAAAAAATTGCGCGC
TCGCAAGCGCCTGTATTTATTACAGGCGAATCAGGTACGGGGAAAGAAGTTGTCGCCAATTTGGTTCACCGTTTAAGTAA
TCGCAACGAAGGACCATTTATTGCAATTAACTGTGGTGCAATCCCCACCGAACTCATGGAAAGCGAGCTATTTGGACACA
AAAAAGGTAGCTTTACAGGAGCGACTCAAGACAAACAAGGTCTGATTCAATCTGCACATGGTGGCAGCTTATTTTTAGAT
GAAATTGCCGAACTGCCACTGAGCATGCAAGTCAAACTGCTGCGTGCCGTTCAGGAAAAGCGCATCCGTCCTGTGGGTTC
AGATAGTGAAATTGATGTCGATTTTCGAGTGATCAGCGCCAGTCATCAGGACTTAGAAAGTTTGGTTCAGCAAGGACGTT
TCCGTCAGGATTTATTCTTCCGTATTCACGTGATGGATTTGGTCTTGCCTGCCTTGCGTGAACGTGGACAAGATATTCTG
TTATTGGCAGACCACTTCATTCAAAAAGTTGCACAAGAATGGGACATTCCTGCCAAACAACTGACACCTCGTGCCCAGCA
ATTTTTATTAGAACAGTACTATCCAGGTAATGTGCGTGAGTTACGCAATATTATTGAACGTGCCATTACCCTGAGTGATG
ATGATGTTATTGATCTCAAACACTTACAAACCGCACCCTTGCGCCAATTCAGTATGAGCAATACAGCAACCACTGAACCA
CAACCTACAGCAGAAACACCACAGCAGATCGTGACAGATGTATTGCTGACAGGACGCAAACTGCCTGAAGAAGGTTTAGA
AGCCTACTTGGAAAAAGTAGAAAAAGACATTTTACTGAATGCGCTGCACCTGACCCACTGGAACCGTACATTGGCAGCAA
AAAAATTGGGCATGTCTTTCCGTTCTTTGCGCTATCGTCTGAAAAAGTTTGGATTAGATACTGAAGATGAGTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (430-470)

• Response regulator receiver domain (Response_reg) (8-117)

• Sigma-54 interaction domain (Sigma54_activat) (141-307)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	76.827	100	0.771
pilR	Pseudomonas aeruginosa PAK	49.571	97.694	0.484