Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   GWK37_RS11145 Genome accession   NZ_CP048002
Coordinates   2256973..2257926 (+) Length   317 a.a.
NCBI ID   WP_015239156.1    Uniprot ID   A0AAP3YGS2
Organism   Bacillus velezensis strain CACC 316     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2251973..2262926
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GWK37_RS11120 (GWK37_11125) - 2252017..2253444 (+) 1428 WP_115940437.1 sensor histidine kinase -
  GWK37_RS11125 (GWK37_11130) rapC 2253602..2254750 (+) 1149 WP_115940438.1 Rap family tetratricopeptide repeat protein Regulator
  GWK37_RS11130 (GWK37_11135) phrC 2254734..2254853 (+) 120 WP_003156334.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  GWK37_RS11135 (GWK37_11140) - 2255005..2255115 (-) 111 WP_369878517.1 YjcZ family sporulation protein -
  GWK37_RS11140 (GWK37_11145) - 2255195..2256559 (-) 1365 WP_072177353.1 aspartate kinase -
  GWK37_RS11145 (GWK37_11150) ceuB 2256973..2257926 (+) 954 WP_015239156.1 ABC transporter permease Machinery gene
  GWK37_RS11150 (GWK37_11155) - 2257916..2258863 (+) 948 WP_014416905.1 iron chelate uptake ABC transporter family permease subunit -
  GWK37_RS11155 (GWK37_11160) - 2258857..2259615 (+) 759 WP_003156330.1 ABC transporter ATP-binding protein -
  GWK37_RS11160 (GWK37_11165) - 2259637..2260581 (+) 945 WP_161512018.1 siderophore ABC transporter substrate-binding protein -
  GWK37_RS11165 (GWK37_11170) - 2260623..2262047 (-) 1425 WP_115940439.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34945.24 Da        Isoelectric Point: 9.6741

>NTDB_id=419244 GWK37_RS11145 WP_015239156.1 2256973..2257926(+) (ceuB) [Bacillus velezensis strain CACC 316]
MKLRYLLLLLAVLACTSIFIGVEDLSPLDIFHLNKEQAGTLFDSRLPRLVSIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLVKMSIAFVFALAGNFLFMKILERIKFNDAIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLIASLVILTVGM
LPFLGLIIPNMVSIYKGDNLRSSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGVIGSGIFLYMLLRRKAYES

Nucleotide


Download         Length: 954 bp        

>NTDB_id=419244 GWK37_RS11145 WP_015239156.1 2256973..2257926(+) (ceuB) [Bacillus velezensis strain CACC 316]
ATGAAGCTACGTTACTTACTTTTGCTACTGGCGGTTTTGGCGTGTACTTCTATATTTATCGGTGTAGAAGATTTGTCGCC
GCTGGATATTTTTCATTTAAATAAAGAACAGGCAGGTACATTATTTGACAGCCGGCTGCCGCGTTTGGTGAGCATTATCA
TCGCCGGCATGAGCCTGAGCATCTGCGGATTAATCATGCAGCAGATCAGCCGGAATAAATTTGTATCGCCGACGACTGCG
GGAACGATGGACTGGGCAAGGCTCGGAATTTTGATTTCATTAATGCTTTTTACGTCAGCGAGTCCGCTTGTGAAAATGTC
TATCGCTTTCGTTTTCGCGTTGGCGGGAAATTTCCTTTTCATGAAAATCCTCGAGAGAATCAAGTTCAATGATGCGATTT
TTATTCCTCTCGTCGGTTTAATGCTTGGGAACATCGTCAGCTCAATCGCCACGTTTATCGCATATAAATACGATCTGATC
CAAAACCTGTCATCTTGGCTGCAGGGAGATTTCTCACTGGTCGTCAAAGGCCGGTATGAGCTTTTATATCTGAGTATCCC
GCTGGTGATCATCGCTTATGTGTATGCGGATAAATTTACGGTGGCGGGAATGGGAGAGAGCTTTTCCGTCAATCTCGGCC
TGAAATACAAACGCGTCGTTAATATCGGTCTGATTATCGTGTCGCTCATCGCTTCACTGGTGATCCTGACCGTCGGGATG
CTGCCGTTTCTCGGTTTGATCATTCCCAATATGGTGTCGATTTACAAAGGGGACAACCTGAGGAGCAGCCTGCCTCACAC
CGCTCTCTTGGGCGCTGTTTTTGTACTGTTTTGCGACATTTTGGGAAGGGTGATCATTTTCCCGTACGAAATTTCCATCG
GCCTGATGGTCGGTGTTATCGGCAGCGGCATCTTCCTGTATATGCTGTTAAGGAGAAAAGCATATGAGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.797

99.685

0.536

Multiple sequence alignment