Detailed information NTG0419242

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: GWK37_RS11125
• Genome accession: NZ_CP048002
• Coordinates: 2253602..2254750 (+)
• Length: 382 a.a.
• NCBI ID: WP_115940438.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain CACC 316
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2248602..2259750

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GWK37_RS11105 (GWK37_11110)	-	2249021..2249704 (-)	684	WP_022552585.1	ABC transporter ATP-binding protein	-
GWK37_RS11110 (GWK37_11115)	-	2249719..2251134 (-)	1416	WP_115940436.1	ABC transporter permease	-
GWK37_RS11115 (GWK37_11120)	-	2251347..2252030 (+)	684	WP_014416901.1	response regulator transcription factor	-
GWK37_RS11120 (GWK37_11125)	-	2252017..2253444 (+)	1428	WP_115940437.1	sensor histidine kinase	-
GWK37_RS11125 (GWK37_11130)	rapC	2253602..2254750 (+)	1149	WP_115940438.1	Rap family tetratricopeptide repeat protein	Regulator
GWK37_RS11130 (GWK37_11135)	phrC	2254734..2254853 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
GWK37_RS11135 (GWK37_11140)	-	2255005..2255115 (-)	111	WP_369878517.1	YjcZ family sporulation protein	-
GWK37_RS11140 (GWK37_11145)	-	2255195..2256559 (-)	1365	WP_072177353.1	aspartate kinase	-
GWK37_RS11145 (GWK37_11150)	ceuB	2256973..2257926 (+)	954	WP_015239156.1	ABC transporter permease	Machinery gene
GWK37_RS11150 (GWK37_11155)	-	2257916..2258863 (+)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
GWK37_RS11155 (GWK37_11160)	-	2258857..2259615 (+)	759	WP_003156330.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45521.78 Da
• Isoelectric Point: 4.9939

>NTDB_id=419242 GWK37_RS11125 WP_115940438.1 2253602..2254750(+) (rapC) [Bacillus velezensis strain CACC 316]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDRMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
INACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=419242 GWK37_RS11125 WP_115940438.1 2253602..2254750(+) (rapC) [Bacillus velezensis strain CACC 316]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAAGCCGAGATCAAACAAGAGCTTGACCGTATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGT
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAACGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

• Tetratricopeptide repeat (TPR_12) (223-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.199	100	0.822
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568