Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | GWK28_RS01480 | Genome accession | NZ_CP047973 |
| Coordinates | 316043..316570 (+) | Length | 175 a.a. |
| NCBI ID | WP_000695065.1 | Uniprot ID | N9K1N5 |
| Organism | Acinetobacter baumannii strain DETAB-P2 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 311043..321570
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GWK28_RS01465 (GWK28_01465) | pilM | 313596..314654 (+) | 1059 | WP_002014066.1 | pilus assembly protein PilM | Machinery gene |
| GWK28_RS01470 (GWK28_01470) | pilN | 314654..315295 (+) | 642 | WP_000201224.1 | PilN domain-containing protein | Machinery gene |
| GWK28_RS01475 (GWK28_01475) | pilO | 315292..316032 (+) | 741 | WP_187142584.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| GWK28_RS01480 (GWK28_01480) | pilP | 316043..316570 (+) | 528 | WP_000695065.1 | pilus assembly protein PilP | Machinery gene |
| GWK28_RS01485 (GWK28_01485) | pilQ | 316633..318798 (+) | 2166 | WP_002062175.1 | type IV pilus secretin PilQ family protein | Machinery gene |
| GWK28_RS01490 (GWK28_01490) | aroK | 318810..319379 (+) | 570 | WP_000643712.1 | shikimate kinase AroK | - |
| GWK28_RS01495 (GWK28_01495) | aroB | 319408..320490 (+) | 1083 | WP_001193997.1 | 3-dehydroquinate synthase | - |
| GWK28_RS01500 (GWK28_01500) | - | 320506..321381 (+) | 876 | WP_000218801.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 175 a.a. Molecular weight: 19419.64 Da Isoelectric Point: 8.9898
>NTDB_id=418890 GWK28_RS01480 WP_000695065.1 316043..316570(+) (pilP) [Acinetobacter baumannii strain DETAB-P2]
MKIKQITLYVLACAVLVGCDSRIDAVNQEMANIRNQPPLPIEPAPIFTPVPQFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNFSRAPQPLESYALEALNMKGSMRNNRGQILALIQTPDQQIERVQVGNYMGMNQGRITHISPTQIDLVEIVPDGREG
YVERPRTLVLIGPAP
MKIKQITLYVLACAVLVGCDSRIDAVNQEMANIRNQPPLPIEPAPIFTPVPQFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNFSRAPQPLESYALEALNMKGSMRNNRGQILALIQTPDQQIERVQVGNYMGMNQGRITHISPTQIDLVEIVPDGREG
YVERPRTLVLIGPAP
Nucleotide
Download Length: 528 bp
>NTDB_id=418890 GWK28_RS01480 WP_000695065.1 316043..316570(+) (pilP) [Acinetobacter baumannii strain DETAB-P2]
ATGAAAATTAAGCAAATTACTCTTTATGTTTTGGCGTGTGCTGTGCTTGTCGGTTGTGATTCAAGAATTGATGCAGTAAA
TCAGGAAATGGCCAATATTCGTAATCAGCCGCCACTCCCTATTGAACCAGCACCGATTTTTACTCCTGTACCACAATTTA
ATTACGCTGCTCATCAATTAAAAAGCCCATTTATGCCAAGTTCTCTAGCTGCCGAGCTCAAGATTATGGCGGGGAAACGG
GTTTATCCGAATTTCTCACGTGCGCCGCAACCACTAGAAAGTTATGCACTTGAAGCTTTAAATATGAAAGGGAGCATGCG
TAATAATCGAGGGCAGATATTGGCCCTAATCCAAACACCGGATCAGCAGATTGAACGGGTACAAGTGGGTAACTATATGG
GTATGAATCAGGGCCGTATTACCCATATTAGTCCAACCCAGATTGATCTGGTTGAAATCGTACCTGATGGTCGAGAAGGC
TATGTCGAAAGACCAAGAACCTTGGTCTTGATTGGGCCTGCACCCTAA
ATGAAAATTAAGCAAATTACTCTTTATGTTTTGGCGTGTGCTGTGCTTGTCGGTTGTGATTCAAGAATTGATGCAGTAAA
TCAGGAAATGGCCAATATTCGTAATCAGCCGCCACTCCCTATTGAACCAGCACCGATTTTTACTCCTGTACCACAATTTA
ATTACGCTGCTCATCAATTAAAAAGCCCATTTATGCCAAGTTCTCTAGCTGCCGAGCTCAAGATTATGGCGGGGAAACGG
GTTTATCCGAATTTCTCACGTGCGCCGCAACCACTAGAAAGTTATGCACTTGAAGCTTTAAATATGAAAGGGAGCATGCG
TAATAATCGAGGGCAGATATTGGCCCTAATCCAAACACCGGATCAGCAGATTGAACGGGTACAAGTGGGTAACTATATGG
GTATGAATCAGGGCCGTATTACCCATATTAGTCCAACCCAGATTGATCTGGTTGAAATCGTACCTGATGGTCGAGAAGGC
TATGTCGAAAGACCAAGAACCTTGGTCTTGATTGGGCCTGCACCCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |
| comL | Acinetobacter baylyi ADP1 |
71.839 |
99.429 |
0.714 |