Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | GWG04_RS14360 | Genome accession | NZ_CP047922 |
| Coordinates | 2883618..2884088 (+) | Length | 156 a.a. |
| NCBI ID | WP_103147866.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain SR231 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2878618..2889088
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GWG04_RS14320 (GWG04_14365) | - | 2878633..2878953 (+) | 321 | WP_001120197.1 | DUF771 domain-containing protein | - |
| GWG04_RS14325 (GWG04_14370) | - | 2878950..2879111 (+) | 162 | WP_031766022.1 | DUF1270 domain-containing protein | - |
| GWG04_RS14330 (GWG04_14375) | - | 2879205..2879508 (+) | 304 | Protein_2805 | DUF2482 family protein | - |
| GWG04_RS14335 (GWG04_14380) | - | 2879513..2879773 (+) | 261 | WP_000291506.1 | DUF1108 family protein | - |
| GWG04_RS14340 (GWG04_14385) | - | 2879782..2880045 (+) | 264 | WP_001205732.1 | hypothetical protein | - |
| GWG04_RS14345 (GWG04_14390) | - | 2880054..2881997 (+) | 1944 | WP_103147865.1 | AAA family ATPase | - |
| GWG04_RS14350 (GWG04_14395) | - | 2881999..2882919 (+) | 921 | WP_000138475.1 | recombinase RecT | - |
| GWG04_RS14355 (GWG04_14400) | - | 2883000..2883617 (+) | 618 | WP_073394849.1 | MBL fold metallo-hydrolase | - |
| GWG04_RS14360 (GWG04_14405) | ssbA | 2883618..2884088 (+) | 471 | WP_103147866.1 | single-stranded DNA-binding protein | Machinery gene |
| GWG04_RS14365 (GWG04_14410) | - | 2884118..2885011 (+) | 894 | WP_031770227.1 | DnaD domain-containing protein | - |
| GWG04_RS14370 (GWG04_14415) | - | 2885018..2885236 (+) | 219 | WP_000338528.1 | hypothetical protein | - |
| GWG04_RS14375 (GWG04_14420) | - | 2885245..2885700 (+) | 456 | WP_000401965.1 | RusA family crossover junction endodeoxyribonuclease | - |
| GWG04_RS14380 (GWG04_14425) | - | 2885713..2886081 (+) | 369 | WP_000101270.1 | SA1788 family PVL leukocidin-associated protein | - |
| GWG04_RS14385 (GWG04_14430) | - | 2886085..2886327 (+) | 243 | WP_000131381.1 | phi PVL orf 51-like protein | - |
| GWG04_RS14390 (GWG04_14435) | - | 2886342..2886596 (+) | 255 | WP_001065045.1 | DUF1024 family protein | - |
| GWG04_RS14395 (GWG04_14440) | - | 2886583..2886744 (+) | 162 | WP_000714417.1 | hypothetical protein | - |
| GWG04_RS14400 (GWG04_14445) | - | 2886744..2887280 (+) | 537 | WP_000185669.1 | dUTP diphosphatase | - |
| GWG04_RS14405 (GWG04_14450) | - | 2887317..2887562 (+) | 246 | WP_001282074.1 | hypothetical protein | - |
| GWG04_RS14410 (GWG04_14455) | - | 2887559..2887765 (+) | 207 | WP_047216556.1 | DUF1381 domain-containing protein | - |
| GWG04_RS14415 (GWG04_14460) | - | 2887762..2887911 (+) | 150 | WP_031761843.1 | transcriptional regulator | - |
| GWG04_RS14420 (GWG04_14465) | - | 2888070..2888721 (+) | 652 | Protein_2823 | hypothetical protein | - |
| GWG04_RS14425 (GWG04_14470) | - | 2888721..2888921 (+) | 201 | WP_000265043.1 | DUF1514 family protein | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17611.49 Da Isoelectric Point: 5.2672
>NTDB_id=418437 GWG04_RS14360 WP_103147866.1 2883618..2884088(+) (ssbA) [Staphylococcus aureus strain SR231]
MINRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINVIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVFVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIEIDDNDLPF
MINRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINVIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVFVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIEIDDNDLPF
Nucleotide
Download Length: 471 bp
>NTDB_id=418437 GWG04_RS14360 WP_103147866.1 2883618..2884088(+) (ssbA) [Staphylococcus aureus strain SR231]
ATGATAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGGACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGTACATTTACAAATGCACAAGGCGAGCGCGAGGCAGACTTTATAAATGTCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTCGATGGCAGATTACAAACGCGT
AATTATGAAAATAAGGAAGGTCAACGTGTGTTTGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAGAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAAATAGATGACAATGATTTACCATTCTAA
ATGATAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGGACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGTACATTTACAAATGCACAAGGCGAGCGCGAGGCAGACTTTATAAATGTCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTCGATGGCAGATTACAAACGCGT
AATTATGAAAATAAGGAAGGTCAACGTGTGTTTGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAGAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAAATAGATGACAATGATTTACCATTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
55.932 |
100 |
0.635 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
50.588 |
100 |
0.551 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
58.491 |
67.949 |
0.397 |