Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Regulator
Locus tag   M594_RS08925 Genome accession   NZ_CP047883
Coordinates   1864522..1865142 (-) Length   206 a.a.
NCBI ID   WP_173876612.1    Uniprot ID   A0A3R9IMI5
Organism   Streptococcus mitis strain S022-V3-A4     
Function   fratricide immunity (predicted from homology)   
Competence regulation

Genomic Context

Location: 1859522..1870142
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M594_RS08900 (M594_08940) recA 1859895..1861049 (-) 1155 WP_173876607.1 recombinase RecA Machinery gene
  M594_RS08905 (M594_08945) cinA 1861104..1862360 (-) 1257 WP_173876608.1 competence/damage-inducible protein A Machinery gene
  M594_RS08910 (M594_08950) brpA 1862428..1863468 (-) 1041 WP_173876609.1 biofilm formation/cell division transcriptional regulator BrpA -
  M594_RS08915 (M594_08955) - 1863473..1863994 (-) 522 WP_173876610.1 GNAT family N-acetyltransferase -
  M594_RS08920 (M594_08960) tsaE 1863984..1864427 (-) 444 WP_173876611.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  M594_RS08925 (M594_08965) comM 1864522..1865142 (-) 621 WP_173876612.1 hypothetical protein Regulator
  M594_RS08930 (M594_08970) ndk 1865278..1865697 (-) 420 WP_173876613.1 nucleoside-diphosphate kinase -
  M594_RS08935 (M594_08975) rpoC 1865806..1869483 (-) 3678 WP_173876614.1 DNA-directed RNA polymerase subunit beta' -

Sequence

Protein


Download         Length: 206 a.a.        Molecular weight: 23907.84 Da        Isoelectric Point: 10.0115

>NTDB_id=418279 M594_RS08925 WP_173876612.1 1864522..1865142(-) (comM) [Streptococcus mitis strain S022-V3-A4]
MKSIRVLLLLAVVQILFGSCLLWKETFLSLRQVNVYFLILIVGVSSFCAGINYFHTSGQKRHSILHSQKKVWMVYTILLV
VNLLASCLVLSESIQIHNKLQQDLVDLFLPSFFFLLGIDLWIFLPFDKYHRDLENLLNRKKTGLLSILATVIFLRNPLTI
SSILVYIVLGFLCARFIFPKSIQREISFYGHIIRDILFVISMFVFF

Nucleotide


Download         Length: 621 bp        

>NTDB_id=418279 M594_RS08925 WP_173876612.1 1864522..1865142(-) (comM) [Streptococcus mitis strain S022-V3-A4]
ATGAAATCAATTCGTGTTTTATTATTATTAGCTGTCGTTCAAATTTTATTTGGAAGTTGTTTATTGTGGAAGGAAACATT
TTTATCTTTAAGACAAGTTAATGTATATTTTTTAATTCTCATAGTCGGAGTTTCTAGCTTTTGTGCTGGGATTAATTACT
TTCATACCTCGGGTCAGAAACGTCATAGCATTTTGCATTCTCAGAAGAAAGTCTGGATGGTTTATACGATTCTTTTGGTG
GTCAACTTGTTAGCATCTTGTCTGGTTTTATCAGAAAGTATCCAAATTCATAACAAATTACAGCAGGATTTGGTTGATCT
TTTTCTACCGTCATTCTTTTTTTTACTAGGTATTGATCTGTGGATTTTTCTGCCTTTTGATAAATACCATCGTGATTTAG
AAAATTTACTGAACAGGAAGAAAACAGGATTGTTATCCATCTTGGCAACTGTTATTTTTTTGAGAAATCCCTTGACGATT
TCTTCAATTCTTGTCTATATAGTTTTGGGATTTCTATGTGCACGATTTATTTTCCCAAAATCTATTCAGAGAGAAATTTC
ATTTTATGGCCATATTATTCGAGATATTTTATTTGTGATTAGTATGTTTGTTTTCTTTTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3R9IMI5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Streptococcus pneumoniae D39

53.883

100

0.539
  comM Streptococcus pneumoniae R6

53.883

100

0.539
  comM Streptococcus pneumoniae TIGR4

53.883

100

0.539
  comM Streptococcus mitis NCTC 12261

41.538

94.66

0.393
  comM Streptococcus mitis SK321

41.026

94.66

0.388

Multiple sequence alignment