Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA   Type   Regulator
Locus tag   M594_RS03150 Genome accession   NZ_CP047883
Coordinates   625999..627957 (+) Length   652 a.a.
NCBI ID   WP_173875936.1    Uniprot ID   A0A6M9FAX1
Organism   Streptococcus mitis strain S022-V3-A4     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 620999..632957
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M594_RS03125 (M594_03150) - 621136..621648 (+) 513 WP_173875932.1 YiiX/YebB-like N1pC/P60 family cysteine hydrolase -
  M594_RS03130 (M594_03155) - 621632..622282 (+) 651 WP_173875933.1 DUF1803 domain-containing protein -
  M594_RS03135 (M594_03160) - 622383..622574 (+) 192 WP_000051182.1 CsbD family protein -
  M594_RS03140 (M594_03165) - 622621..624066 (-) 1446 WP_173875934.1 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase -
  M594_RS03145 (M594_03170) - 624172..625794 (+) 1623 WP_173875935.1 putative polysaccharide biosynthesis protein -
  M594_RS03150 (M594_03175) amiA 625999..627957 (+) 1959 WP_173875936.1 peptide ABC transporter substrate-binding protein Regulator
  M594_RS03155 (M594_03180) - 628273..628728 (+) 456 WP_173875937.1 hypothetical protein -
  M594_RS03160 (M594_03185) - 628894..629988 (+) 1095 WP_173875938.1 cystathionine gamma-synthase -
  M594_RS03165 (M594_03190) - 629996..631162 (+) 1167 WP_173875939.1 MalY/PatB family protein -

Sequence

Protein


Download         Length: 652 a.a.        Molecular weight: 72526.91 Da        Isoelectric Point: 4.8607

>NTDB_id=418250 M594_RS03150 WP_173875936.1 625999..627957(+) (amiA) [Streptococcus mitis strain S022-V3-A4]
MKKSKAKYAALAGVVLSAGILLSACGNSSTGSKAYNYVYTSDPSSLNYLAENRATTNDIVVNLVDGLMENDQYGNYIPSL
AEDWSVSKDGLTYTYKLRKDAKWYTADGEEYAPVTAQDFVTGLKYAADKKSEALYLVQESVAGLDDYITGKTTDFSTVGV
KAIDDQTVQYTLTRPESYWNSKTTSTILFPVNAEFLKSKGDDFGTVDPSSILYNGPFLMKSFVSKSVIEFKKNPNYWDAK
NVFVDDVKLAYYDGSDQDALARNFVEGAYSYARLYPNSSSFEGIKEKNKDNIIYSLQDATSYFLNFNLDRKSYKFTSKTS
DAEKKSTQEAVLNKNFRQAINFAYDRTAYGAQSQGEDGATKILRNLVVPPNFVSINGKDFGEVVASKMVNYGKEWQGINF
ADAQDPYYNAEKAKAKFAEAKKELQAKGVQFPIHLDMTVDQAAKKGVQEANSMKQSIEAALGAENVVIDIQQLTTEDFDN
TSYLAQTAAQKDYDLYNGGWGPDYQDPSTYLDVLNVNSGGLLQNLGLEPGEANDKAKAVGLDVYTQMLEEANKEQDLAKR
YDKYADIQAWLVDSALAIPNVSKGGTPVLRKTVPFSEPYSLAGNKGIESYKYLKVQDKTVTKEEYEKAKEKWLKEKEESN
KKAQEELAKHVK

Nucleotide


Download         Length: 1959 bp        

>NTDB_id=418250 M594_RS03150 WP_173875936.1 625999..627957(+) (amiA) [Streptococcus mitis strain S022-V3-A4]
ATGAAAAAGTCTAAAGCCAAGTATGCAGCACTTGCAGGTGTCGTGTTAAGTGCAGGTATTTTATTAAGCGCGTGTGGAAA
TTCTAGCACAGGGTCAAAGGCATATAACTATGTTTACACTAGTGATCCATCTAGTTTGAATTACCTAGCAGAAAACCGTG
CAACGACCAATGATATCGTGGTTAATTTGGTAGATGGGCTCATGGAAAATGACCAGTATGGGAACTATATCCCATCCTTG
GCAGAGGATTGGAGTGTATCCAAGGATGGTTTGACCTATACCTACAAACTGCGTAAAGATGCTAAATGGTATACTGCAGA
TGGGGAAGAATATGCTCCTGTAACTGCCCAAGATTTTGTAACAGGTTTGAAATATGCGGCTGATAAAAAATCAGAAGCCT
TGTACTTAGTTCAAGAATCCGTTGCTGGTTTAGATGACTATATCACTGGTAAAACAACAGACTTTTCAACTGTTGGAGTT
AAGGCTATTGACGACCAAACGGTTCAATATACCTTGACACGACCAGAATCTTATTGGAACTCAAAAACAACTTCAACCAT
TCTCTTCCCAGTTAATGCGGAGTTCTTGAAATCAAAAGGGGATGATTTTGGAACAGTTGATCCTTCAAGTATTTTGTACA
ATGGACCTTTCTTGATGAAATCCTTTGTTTCAAAATCTGTCATCGAATTCAAGAAAAATCCTAACTACTGGGATGCTAAA
AATGTCTTTGTAGATGATGTGAAATTGGCCTATTATGATGGTAGTGACCAAGATGCACTGGCTCGTAACTTTGTAGAAGG
TGCTTATAGCTACGCTCGTCTTTATCCAAATAGTTCAAGTTTTGAAGGAATTAAAGAAAAGAATAAGGACAATATCATTT
ATAGTTTACAAGATGCTACTTCTTACTTCTTAAACTTTAATCTAGATAGAAAATCTTATAAATTCACTTCCAAGACAAGT
GATGCTGAGAAGAAATCGACTCAAGAAGCGGTTCTTAACAAAAATTTCCGTCAAGCCATCAACTTTGCCTATGATCGTAC
AGCTTACGGGGCTCAATCTCAGGGAGAAGATGGTGCAACTAAGATTTTGCGTAACTTGGTTGTTCCTCCAAACTTCGTAA
GTATCAACGGAAAAGACTTTGGTGAAGTAGTAGCCTCTAAGATGGTTAATTATGGTAAGGAATGGCAAGGAATCAACTTT
GCGGATGCCCAAGATCCATACTACAATGCTGAAAAAGCCAAGGCTAAATTTGCAGAGGCTAAGAAAGAACTCCAAGCTAA
AGGAGTCCAATTCCCTATTCACTTGGACATGACAGTTGACCAAGCTGCTAAAAAGGGTGTTCAAGAGGCAAACTCTATGA
AGCAATCTATTGAGGCAGCTTTAGGTGCAGAAAATGTTGTAATTGATATTCAACAACTCACTACTGAAGACTTTGATAAT
ACAAGCTATTTGGCTCAGACTGCAGCACAGAAGGATTATGATCTTTACAACGGTGGTTGGGGTCCTGATTACCAAGATCC
TTCAACCTATCTGGATGTCTTAAATGTTAATTCTGGTGGTTTGCTGCAAAATCTTGGTTTAGAGCCAGGTGAAGCCAATG
ACAAGGCCAAGGCAGTTGGATTGGATGTCTACACTCAAATGTTGGAAGAAGCTAATAAGGAACAAGATCTTGCAAAACGC
TATGACAAGTATGCTGATATTCAAGCGTGGTTGGTAGATAGTGCTTTAGCAATTCCAAATGTGTCTAAGGGTGGAACACC
AGTATTGAGAAAAACAGTTCCTTTCTCAGAACCATATTCATTGGCTGGTAATAAAGGTATCGAATCATATAAATACCTCA
AAGTACAAGATAAGACAGTCACAAAAGAAGAGTATGAAAAAGCCAAAGAAAAATGGCTGAAAGAAAAAGAAGAATCCAAT
AAAAAAGCCCAAGAAGAATTGGCAAAACATGTCAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(76-518)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6M9FAX1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA Streptococcus salivarius strain HSISS4

57.599

100

0.581
  amiA3 Streptococcus thermophilus LMG 18311

56.297

100

0.569
  amiA3 Streptococcus thermophilus LMD-9

56.146

100

0.567

Multiple sequence alignment