Detailed information
Bioinformatically predicted
Overview
| Name | comE | Type | Machinery gene |
| Locus tag | NIT79A3_RS01085 | Genome accession | NC_015731 |
| Coordinates | 252882..253169 (+) | Length | 95 a.a. |
| NCBI ID | WP_013964427.1 | Uniprot ID | F8GG14 |
| Organism | Nitrosomonas sp. Is79A3 | ||
| Function | DNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 247882..258169
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NIT79A3_RS01070 (Nit79A3_0214) | - | 249003..249749 (-) | 747 | WP_013964424.1 | Nif3-like dinuclear metal center hexameric protein | - |
| NIT79A3_RS01075 (Nit79A3_0215) | - | 249824..250966 (+) | 1143 | WP_013964425.1 | Do family serine endopeptidase | - |
| NIT79A3_RS01080 (Nit79A3_0216) | - | 251007..252659 (+) | 1653 | WP_013964426.1 | membrane protein | - |
| NIT79A3_RS01085 (Nit79A3_0217) | comE | 252882..253169 (+) | 288 | WP_013964427.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| NIT79A3_RS01090 (Nit79A3_0218) | cysM | 253300..254187 (+) | 888 | WP_013964428.1 | cysteine synthase CysM | - |
| NIT79A3_RS01095 (Nit79A3_0219) | ybgC | 254496..254906 (+) | 411 | WP_013964429.1 | tol-pal system-associated acyl-CoA thioesterase | - |
| NIT79A3_RS01100 (Nit79A3_0220) | tolQ | 254903..255583 (+) | 681 | WP_013964430.1 | protein TolQ | - |
| NIT79A3_RS01105 (Nit79A3_0221) | tolR | 255603..256016 (+) | 414 | WP_013964431.1 | protein TolR | - |
| NIT79A3_RS01110 (Nit79A3_0222) | tolA | 256027..257067 (+) | 1041 | WP_013964432.1 | cell envelope integrity protein TolA | - |
Sequence
Protein
Download Length: 95 a.a. Molecular weight: 9938.53 Da Isoelectric Point: 5.8173
>NTDB_id=41637 NIT79A3_RS01085 WP_013964427.1 252882..253169(+) (comE) [Nitrosomonas sp. Is79A3]
MKQLFLMMTLLFLFTGAALAAVNINTASQAELEALQGIGPAKAKAIIEHREKTGAFASIDDLAKVSGIGPGTVKQLRDAV
TVESEKSAEAPAKPE
MKQLFLMMTLLFLFTGAALAAVNINTASQAELEALQGIGPAKAKAIIEHREKTGAFASIDDLAKVSGIGPGTVKQLRDAV
TVESEKSAEAPAKPE
Nucleotide
Download Length: 288 bp
>NTDB_id=41637 NIT79A3_RS01085 WP_013964427.1 252882..253169(+) (comE) [Nitrosomonas sp. Is79A3]
ATGAAGCAACTTTTTTTAATGATGACTTTATTATTTCTGTTTACGGGTGCAGCTCTCGCAGCTGTTAATATCAATACCGC
TTCGCAAGCTGAGCTGGAAGCTCTGCAAGGAATTGGTCCTGCTAAAGCAAAAGCGATCATTGAGCATCGCGAGAAAACCG
GTGCTTTTGCTTCGATAGATGATTTAGCGAAGGTGAGCGGTATTGGTCCGGGAACCGTCAAACAACTGCGTGATGCGGTT
ACCGTAGAGAGTGAGAAAAGCGCAGAGGCTCCAGCCAAACCGGAGTAA
ATGAAGCAACTTTTTTTAATGATGACTTTATTATTTCTGTTTACGGGTGCAGCTCTCGCAGCTGTTAATATCAATACCGC
TTCGCAAGCTGAGCTGGAAGCTCTGCAAGGAATTGGTCCTGCTAAAGCAAAAGCGATCATTGAGCATCGCGAGAAAACCG
GTGCTTTTGCTTCGATAGATGATTTAGCGAAGGTGAGCGGTATTGGTCCGGGAACCGTCAAACAACTGCGTGATGCGGTT
ACCGTAGAGAGTGAGAAAAGCGCAGAGGCTCCAGCCAAACCGGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comE | Neisseria gonorrhoeae MS11 |
55.319 |
98.947 |
0.547 |
| comE | Neisseria gonorrhoeae MS11 |
55.319 |
98.947 |
0.547 |
| comE | Neisseria gonorrhoeae MS11 |
55.319 |
98.947 |
0.547 |
| comE | Neisseria gonorrhoeae MS11 |
55.319 |
98.947 |
0.547 |
| Cj0011c | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
52.5 |
84.211 |
0.442 |