Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | E3T04_RS06725 | Genome accession | NZ_CP047782 |
| Coordinates | 1354582..1354893 (-) | Length | 103 a.a. |
| NCBI ID | WP_000472257.1 | Uniprot ID | A0A115HMG3 |
| Organism | Staphylococcus aureus strain UP_1352 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1349582..1359893
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3T04_RS06690 (E3T04_06690) | gcvPA | 1350084..1351430 (-) | 1347 | WP_000019697.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| E3T04_RS06695 (E3T04_06695) | gcvT | 1351450..1352541 (-) | 1092 | WP_000093347.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| E3T04_RS06700 (E3T04_06700) | - | 1352700..1353224 (-) | 525 | WP_001015125.1 | shikimate kinase | - |
| E3T04_RS06705 (E3T04_06705) | - | 1353214..1353360 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| E3T04_RS06710 (E3T04_06710) | comGF | 1353457..1353954 (-) | 498 | WP_001794055.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| E3T04_RS06715 (E3T04_06715) | comGE | 1353872..1354171 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| E3T04_RS06720 (E3T04_06720) | comGD | 1354158..1354604 (-) | 447 | WP_001791207.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| E3T04_RS06725 (E3T04_06725) | comGC | 1354582..1354893 (-) | 312 | WP_000472257.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| E3T04_RS06730 (E3T04_06730) | comGB | 1354907..1355977 (-) | 1071 | WP_000776412.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| E3T04_RS06735 (E3T04_06735) | comGA | 1355949..1356923 (-) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| E3T04_RS06740 (E3T04_06740) | - | 1356975..1357598 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| E3T04_RS06745 (E3T04_06745) | - | 1357595..1357924 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| E3T04_RS06750 (E3T04_06750) | - | 1357924..1358910 (-) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| E3T04_RS06755 (E3T04_06755) | - | 1358907..1359110 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 103 a.a. Molecular weight: 11373.39 Da Isoelectric Point: 7.8600
>NTDB_id=415963 E3T04_RS06725 WP_000472257.1 1354582..1354893(-) (comGC) [Staphylococcus aureus strain UP_1352]
MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQSTGCNAQVKMVNSQIEAYALKHNRNPSSIEDLIADGFI
KEEQKTCKSGETITISNGEAVAN
MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQSTGCNAQVKMVNSQIEAYALKHNRNPSSIEDLIADGFI
KEEQKTCKSGETITISNGEAVAN
Nucleotide
Download Length: 312 bp
>NTDB_id=415963 E3T04_RS06725 WP_000472257.1 1354582..1354893(-) (comGC) [Staphylococcus aureus strain UP_1352]
ATGTTTAAATTTCTTAAGAAAACTCAAGCGTTTACATTGATAGAGATGCTATTAGTGTTATTAATCATCAGTTTATTATT
AATTTTAATCATTCCAAATATTGCTAAACAAACTGCTCACATACAATCAACAGGTTGTAATGCACAGGTAAAAATGGTTA
ATAGTCAAATTGAAGCGTATGCATTGAAACATAATAGAAATCCATCGTCTATTGAAGACTTAATTGCAGATGGTTTTATA
AAAGAAGAGCAAAAGACATGTAAATCAGGAGAGACAATAACAATTAGTAATGGAGAAGCAGTTGCAAATTAG
ATGTTTAAATTTCTTAAGAAAACTCAAGCGTTTACATTGATAGAGATGCTATTAGTGTTATTAATCATCAGTTTATTATT
AATTTTAATCATTCCAAATATTGCTAAACAAACTGCTCACATACAATCAACAGGTTGTAATGCACAGGTAAAAATGGTTA
ATAGTCAAATTGAAGCGTATGCATTGAAACATAATAGAAATCCATCGTCTATTGAAGACTTAATTGCAGATGGTTTTATA
AAAGAAGAGCAAAAGACATGTAAATCAGGAGAGACAATAACAATTAGTAATGGAGAAGCAGTTGCAAATTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Staphylococcus aureus N315 |
99.029 |
100 |
0.99 |
| comGC | Staphylococcus aureus MW2 |
99.029 |
100 |
0.99 |
| comGC/cglC | Streptococcus mitis SK321 |
48.039 |
99.029 |
0.476 |
| comGC/cglC | Streptococcus pneumoniae R6 |
47.059 |
99.029 |
0.466 |
| comGC/cglC | Streptococcus pneumoniae D39 |
47.059 |
99.029 |
0.466 |
| comGC/cglC | Streptococcus pneumoniae TIGR4 |
47.059 |
99.029 |
0.466 |
| comGC/cglC | Streptococcus pneumoniae Rx1 |
47.059 |
99.029 |
0.466 |
| comGC/cglC | Streptococcus mitis NCTC 12261 |
52.326 |
83.495 |
0.437 |
| comYC | Streptococcus gordonii str. Challis substr. CH1 |
42.857 |
95.146 |
0.408 |
| comYC | Streptococcus suis isolate S10 |
50 |
75.728 |
0.379 |
| comYC | Streptococcus mutans UA140 |
50 |
73.786 |
0.369 |
| comYC | Streptococcus mutans UA159 |
50 |
73.786 |
0.369 |
| comGC | Bacillus subtilis subsp. subtilis str. 168 |
41.758 |
88.35 |
0.369 |
| comGC | Lactococcus lactis subsp. cremoris KW2 |
46.341 |
79.612 |
0.369 |