Detailed information NTG0415082

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: H8S71_RS13415
• Genome accession: NZ_CP060417
• Coordinates: 2614271..2614876 (-)
• Length: 201 a.a.
• NCBI ID: WP_187001831.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis strain ONU 559
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2609271..2619876

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H8S71_RS13385 (H8S71_13380)	-	2610084..2610473 (+)	390	WP_031315243.1	TIGR04086 family membrane protein	-
H8S71_RS13390 (H8S71_13385)	yajC	2610530..2610796 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
H8S71_RS13395 (H8S71_13390)	tgt	2610833..2611978 (-)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
H8S71_RS13400 (H8S71_13395)	queA	2612005..2613033 (-)	1029	WP_003229723.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
H8S71_RS13405 (H8S71_13400)	yrzS	2613063..2613263 (-)	201	WP_003222669.1	DUF2905 domain-containing protein	-
H8S71_RS13410 (H8S71_13405)	ruvB	2613256..2614260 (-)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
H8S71_RS13415 (H8S71_13410)	ruvA	2614271..2614876 (-)	606	WP_187001831.1	Holliday junction branch migration protein RuvA	Machinery gene
H8S71_RS13420 (H8S71_13415)	bofC	2615015..2615527 (-)	513	WP_014480438.1	sporulation cell-cell signaling protein BofC	-
H8S71_RS13425 (H8S71_13420)	csbX	2615575..2616882 (-)	1308	WP_003246197.1	MFS transporter	-
H8S71_RS13430 (H8S71_13425)	iolG	2616953..2617978 (-)	1026	WP_032726305.1	inositol 2-dehydrogenase	-
H8S71_RS13435 (H8S71_13430)	yrzF	2618216..2618863 (+)	648	WP_015251558.1	phosphotransferase	-
H8S71_RS13440 (H8S71_13435)	-	2618909..2619031 (-)	123	WP_003229707.1	hypothetical protein	-
H8S71_RS20555	-	2619116..2619190 (+)	75	Protein_2619	hypothetical protein	-
H8S71_RS13445 (H8S71_13440)	-	2619194..2619562 (+)	369	WP_257724450.1	DUF5412 domain-containing protein	-
H8S71_RS13450 (H8S71_13445)	-	2619569..2619709 (+)	141	WP_004398683.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22574.04 Da
• Isoelectric Point: 5.4072

>NTDB_id=415082 H8S71_RS13415 WP_187001831.1 2614271..2614876(-) (ruvA) [Bacillus subtilis subsp. subtilis strain ONU 559]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLSHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=415082 H8S71_RS13415 WP_187001831.1 2614271..2614876(-) (ruvA) [Bacillus subtilis subsp. subtilis strain ONU 559]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAGGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTACGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAAGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTTCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA N terminal domain (RuvA_N) (1-59)

• RuvA, C-terminal domain (RuvA_C) (155-199)

• Helix-hairpin-helix domain (HHH_5) (69-126)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	99.502	100	0.995
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408