Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   GNE05_RS16150 Genome accession   NZ_CP047644
Coordinates   3258626..3260977 (-) Length   783 a.a.
NCBI ID   WP_328700097.1    Uniprot ID   -
Organism   Bacillus sp. AM1(2019)     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3253626..3265977
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GNE05_RS16110 (GNE05_16110) - 3254086..3254517 (+) 432 WP_007613424.1 Na(+)/H(+) antiporter subunit B -
  GNE05_RS16115 (GNE05_16115) - 3254517..3254858 (+) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  GNE05_RS16120 (GNE05_16120) - 3254851..3256332 (+) 1482 WP_041482212.1 Na+/H+ antiporter subunit D -
  GNE05_RS16125 (GNE05_16125) - 3256338..3256814 (+) 477 WP_052827786.1 Na+/H+ antiporter subunit E -
  GNE05_RS16130 (GNE05_16130) - 3256814..3257098 (+) 285 WP_003152057.1 Na(+)/H(+) antiporter subunit F1 -
  GNE05_RS16135 (GNE05_16135) mnhG 3257082..3257456 (+) 375 WP_007613429.1 monovalent cation/H(+) antiporter subunit G -
  GNE05_RS16140 (GNE05_16140) - 3257496..3257879 (-) 384 WP_160182981.1 hotdog fold thioesterase -
  GNE05_RS16145 (GNE05_16145) comA 3257901..3258545 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  GNE05_RS16150 (GNE05_16150) comP 3258626..3260977 (-) 2352 WP_328700097.1 histidine kinase Regulator
  GNE05_RS16155 (GNE05_16155) comX 3260955..3261125 (-) 171 WP_032863917.1 competence pheromone ComX -
  GNE05_RS16160 (GNE05_16160) - 3261125..3262051 (-) 927 WP_014721741.1 polyprenyl synthetase family protein -
  GNE05_RS16165 (GNE05_16165) degQ 3262182..3262322 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  GNE05_RS16170 (GNE05_16170) - 3262787..3263128 (+) 342 WP_021495366.1 hypothetical protein -
  GNE05_RS16175 (GNE05_16175) - 3263135..3264358 (-) 1224 WP_007613436.1 EAL and HDOD domain-containing protein -
  GNE05_RS16180 (GNE05_16180) - 3264488..3265954 (-) 1467 WP_014418767.1 nicotinate phosphoribosyltransferase -

Sequence


Protein


Download         Length: 783 a.a.        Molecular weight: 90742.98 Da        Isoelectric Point: 9.0676

>NTDB_id=414897 GNE05_RS16150 WP_328700097.1 3258626..3260977(-) (comP) [Bacillus sp. AM1(2019)]
MTQLGLLKKQESCGSLRQLLKCFTVALLLFGIFYFTFIIYYTQNGILIGTKVVQSSNQELKVVDISKSSYGRIMGLKIGD
RITEINGGKPKKENIYGSYLAKIKYLKVERDGRLIELKNIEFIYLDSPYSFFSYIIPCIFFLLSLICIFYIFKVNLRKDS
VSAYILICFLLCISIAYLSAGGVTRGYRINRYINLYTFLAVPVLYLNFLHQYFKELKVKFSRGIYVGLLYLLPLINILLE
LFRDRIGHHLIVSLNLLTFLLEMIVVYVSLILYQIKHRKKDFSYLLKVLLVSNTIAFLPFSLLYIAPLIIFGQYVYSAVV
TAPFLLLIPLALVYQFVVNKIYNIDFLLGRLRYYCLLAVIPTIGIVWVFVVFINKNKNFDTFQITLFVFLIMLAVFYFKE
VLDFKFRLKRFSEKYNYQDSIFKYTQLLKSVSALNQVFMNLKKTILDVLPVSKAYIFEINSDGDILYFDKQNSEPNWQPY
KKEFDKVTSEIGKIIEVNQGFLMKIGERGANSYVLLCLSSINTPRLTRDEISWLKTLSFYTSVSMENILQIEELMNHLQD
LKQQGSNPVWLKKLMFTIEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCHIEVQDKLHQMNEQMSDVILMT
RETCHELRPQLLYDLGLVKAVSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLI
SIQNKVILHYEDDGVGCNQEEGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKADIEMEL

Nucleotide


Download         Length: 2352 bp        

>NTDB_id=414897 GNE05_RS16150 WP_328700097.1 3258626..3260977(-) (comP) [Bacillus sp. AM1(2019)]
ATGACCCAGCTTGGTTTACTTAAAAAACAAGAGAGTTGTGGTTCCTTGAGACAATTGCTGAAATGTTTTACGGTTGCTTT
ATTATTGTTCGGAATTTTTTATTTTACTTTTATAATTTATTATACTCAGAATGGAATATTAATAGGAACAAAAGTAGTTC
AGTCTTCTAACCAAGAATTAAAAGTTGTGGATATTTCAAAATCTTCTTATGGAAGAATAATGGGTCTAAAAATTGGGGAC
AGAATTACTGAAATAAATGGCGGAAAACCTAAAAAAGAAAATATTTATGGTTCATACCTTGCGAAAATTAAGTATTTAAA
AGTTGAGAGAGACGGGCGTTTAATAGAACTTAAAAATATTGAATTCATTTATTTAGATAGTCCATATAGTTTCTTTTCGT
ATATTATTCCGTGTATCTTTTTTCTTCTTAGTTTAATATGCATATTTTATATATTTAAAGTCAACCTAAGAAAAGATAGC
GTCTCAGCGTATATTCTTATTTGCTTTTTACTGTGTATTTCTATTGCATACTTAAGCGCAGGAGGGGTTACAAGAGGTTA
TCGTATTAATAGGTACATTAATCTTTACACCTTTTTAGCTGTGCCTGTTTTATATCTAAATTTCTTGCATCAATATTTCA
AAGAACTTAAAGTGAAATTTTCGAGAGGAATTTACGTTGGTTTATTGTACCTTCTTCCTCTAATTAATATCCTGCTTGAA
TTATTTAGAGATAGAATAGGTCATCATTTAATTGTAAGCCTTAACCTTTTAACATTTTTATTAGAAATGATTGTAGTTTA
TGTTAGTCTCATATTATATCAAATAAAACATAGAAAAAAGGATTTCTCTTACCTGTTAAAAGTACTTCTGGTTTCTAATA
CAATTGCTTTTTTACCCTTTTCTTTATTATATATTGCTCCATTGATTATTTTTGGACAATATGTATATAGCGCTGTAGTT
ACTGCACCTTTTCTTCTGCTCATACCTTTAGCATTGGTATATCAATTTGTCGTAAATAAGATTTACAACATTGATTTCTT
GTTAGGCCGTTTGAGGTATTATTGCTTGTTAGCAGTTATTCCGACGATAGGAATCGTTTGGGTATTTGTAGTATTCATCA
ACAAAAATAAAAATTTTGACACTTTCCAAATTACATTGTTTGTATTTCTAATCATGCTAGCCGTTTTTTATTTCAAAGAA
GTTCTAGACTTTAAGTTTCGCTTAAAGCGTTTCTCTGAAAAATACAATTACCAAGACAGCATATTTAAATATACACAGCT
TCTTAAAAGCGTATCAGCTTTAAATCAAGTGTTTATGAATTTGAAAAAGACTATTTTGGACGTCTTGCCTGTTAGTAAAG
CTTATATATTTGAAATCAATTCTGACGGAGACATTCTGTATTTTGATAAACAGAACAGTGAACCGAACTGGCAGCCGTAT
AAAAAAGAATTTGATAAAGTCACATCAGAGATTGGCAAGATTATTGAAGTAAATCAAGGTTTTCTGATGAAGATTGGAGA
AAGAGGGGCAAACTCATACGTTCTGCTTTGTTTGTCGAGCATTAATACTCCAAGACTGACAAGAGATGAGATATCTTGGT
TAAAGACATTGTCTTTTTATACAAGTGTTTCGATGGAAAACATATTGCAGATCGAAGAACTCATGAACCATTTACAAGAT
CTAAAGCAACAAGGCTCAAACCCGGTCTGGCTCAAAAAGCTGATGTTTACGATCGAGGAAAAGCAGCGTTCGGATTTGGC
CCGTGATCTGCATGATTCAGTGCTGCAGGACTTGATTTCTTTGAAGCGCCAGTGTGAGCTGTTTCTGGCCGATTTTAAGA
AAGAGGAGCCTTGCCACATAGAGGTGCAGGACAAGCTTCATCAGATGAATGAGCAGATGTCGGATGTCATTTTGATGACC
CGGGAGACGTGCCATGAGCTTCGTCCTCAGCTGCTGTATGATTTGGGTCTGGTCAAGGCGGTATCCAAGCTTGCCGCGCA
GCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGGCCGGTTTACGGCGGCGCTGGATTTGGATACGCAGCTGA
ATTTGTACCGCATTATTCAGGAATTTCTTTCGAACGCCATGAAGCATTCTCAGGCGAATGAGGTGCTGATTATGCTGATC
AGCATTCAAAATAAAGTGATTCTGCATTATGAAGACGACGGTGTCGGCTGCAATCAGGAAGAAGGCGGCGGGCAGTCGAT
GAGCATGGGTCTTTCGGGTATTAAGGAGCGCGTCCGTGCGCTTGACGGACGGATGAAAATCGACACAAGTGAAGGAAACG
GTTTTAAAGCGGATATTGAAATGGAATTGTAA

Domains


Predicted by InterproScan.

(583-652)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

61.219

98.467

0.603


Multiple sequence alignment