Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   H7684_RS10445 Genome accession   NZ_CP060278
Coordinates   2183066..2184055 (-) Length   329 a.a.
NCBI ID   WP_031768952.1    Uniprot ID   -
Organism   Staphylococcus aureus strain KZN     
Function   repress the expression of comX (predicted from homology)   
Competence regulation

Genomic Context

Location: 2178066..2189055
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7684_RS10430 (H7684_10430) acsA 2179267..2180973 (-) 1707 WP_000862095.1 acetate--CoA ligase -
  H7684_RS10435 (H7684_10435) - 2181142..2181774 (+) 633 WP_001016004.1 hypothetical protein -
  H7684_RS10440 (H7684_10440) - 2181799..2182968 (+) 1170 WP_001184015.1 acetoin utilization protein AcuC -
  H7684_RS10445 (H7684_10445) ccpA 2183066..2184055 (-) 990 WP_031768952.1 catabolite control protein A Regulator
  H7684_RS10450 (H7684_10450) - 2184128..2184241 (-) 114 WP_001788994.1 hypothetical protein -
  H7684_RS10455 (H7684_10455) - 2184595..2185686 (-) 1092 WP_000066378.1 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase -
  H7684_RS10460 (H7684_10460) - 2186141..2186224 (-) 84 WP_031761406.1 hypothetical protein -
  H7684_RS10465 (H7684_10465) - 2186380..2187738 (-) 1359 WP_000193903.1 hypothetical protein -
  H7684_RS10470 (H7684_10470) - 2187812..2188303 (-) 492 WP_000383814.1 DUF948 domain-containing protein -

Sequence

Protein


Download         Length: 329 a.a.        Molecular weight: 36060.24 Da        Isoelectric Point: 5.5054

>NTDB_id=414709 H7684_RS10445 WP_031768952.1 2183066..2184055(-) (ccpA) [Staphylococcus aureus strain KZN]
MTVTIYDVAREARVSMATVSRVVNGNQNVKAETKNKVNEVIKRLNYRPNAVARGLASKKTTTVGVIIPDISNIYYSQLAR
GLEDIATMYKYHSIISNSDNDPEKEKEIFNNLLSKQVDGIIFLGGTITEEMKELINQSSVPVVVSGTNGKDAHIASVNID
FTEAAKEITGELIEKGAKSFALVGGEHSKKAQEDVLEGLTEVLNKNGIQLGDTLNCSGAESYKEGVKAFAKMKGNLPDAI
LCISDEEAIGIMHSAMDAGIKVPEELQIISFNNTRLVEMVRPQLSSVIQPLYDIGAVGMRLLTKYMNDEKIEEPNVVLPH
RIEYRGTTK

Nucleotide


Download         Length: 990 bp        

>NTDB_id=414709 H7684_RS10445 WP_031768952.1 2183066..2184055(-) (ccpA) [Staphylococcus aureus strain KZN]
ATGACAGTTACTATATATGATGTAGCAAGAGAAGCGCGTGTCTCTATGGCCACAGTGTCGCGTGTTGTTAATGGGAACCA
AAATGTTAAAGCAGAAACTAAAAATAAAGTTAACGAAGTCATTAAGCGTTTGAATTATCGTCCAAATGCTGTTGCTAGAG
GTTTAGCTAGTAAAAAGACAACAACAGTAGGTGTGATCATTCCAGATATATCTAATATCTATTATTCACAACTTGCTCGT
GGACTTGAAGATATTGCAACAATGTATAAATATCACTCAATTATTTCAAATTCAGATAACGATCCTGAAAAGGAAAAAGA
AATTTTTAATAACTTATTAAGTAAACAGGTTGATGGTATTATTTTCCTTGGTGGTACAATTACTGAAGAAATGAAAGAAT
TGATAAATCAATCATCTGTACCTGTAGTAGTATCAGGAACAAATGGTAAGGATGCACATATAGCATCAGTTAATATTGAT
TTTACTGAAGCTGCGAAAGAAATTACGGGAGAATTAATTGAAAAAGGCGCTAAATCATTTGCTTTAGTAGGTGGAGAACA
TTCTAAAAAAGCTCAAGAAGATGTTTTAGAAGGTTTAACTGAAGTGTTAAATAAAAATGGCATTCAATTAGGTGATACAT
TGAATTGTTCTGGTGCTGAAAGTTATAAAGAAGGCGTAAAAGCTTTTGCTAAAATGAAAGGCAATTTGCCAGATGCCATT
TTATGTATCAGCGACGAAGAAGCAATTGGTATTATGCATAGTGCAATGGATGCTGGTATTAAAGTTCCAGAGGAATTACA
AATTATTAGTTTCAATAATACACGATTAGTTGAGATGGTTAGACCACAACTTTCTAGTGTTATTCAACCATTATATGATA
TCGGTGCAGTAGGGATGCGCTTATTAACAAAATATATGAACGATGAAAAGATAGAAGAACCAAATGTAGTTTTACCTCAC
AGAATTGAATACCGAGGAACTACAAAATAA

Domains

Predicted by InterProScan.

Bacterial regulatory proteins, lacI family (LacI)

(4-49)

Periplasmic binding protein-like domain (Peripla_BP_3)

(171-328)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

48.182

100

0.483
  ccpA Streptococcus gordonii str. Challis substr. CH1

46.809

100

0.468
  ccpA Streptococcus pneumoniae D39

46.505

100

0.465