Detailed information NTG0414226

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: GRX76_RS17680
• Genome accession: NZ_CP047569
• Coordinates: 4280379..4281833 (+)
• Length: 484 a.a.
• NCBI ID: WP_160154503.1
• Uniprot ID: -
• Organism: Microbulbifer sp. ALW1
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 4275379..4286833

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GRX76_RS17665	-	4275907..4276851 (+)	945	WP_160154500.1	outer membrane protein assembly factor BamD	-
GRX76_RS17670	-	4276938..4278584 (-)	1647	WP_160154501.1	NAD+ synthase	-
GRX76_RS17675	-	4278688..4280343 (+)	1656	WP_160154502.1	ATP-binding protein	-
GRX76_RS17680	pilR	4280379..4281833 (+)	1455	WP_160154503.1	sigma-54 dependent transcriptional regulator	Regulator
GRX76_RS17685	-	4281929..4282492 (+)	564	WP_160154504.1	GspH/FimT family pseudopilin	-
GRX76_RS17690	-	4282517..4282957 (-)	441	WP_160154505.1	type IV pilin protein	-
GRX76_RS17695	-	4283011..4286436 (-)	3426	WP_160154506.1	pilus assembly protein	-

Sequence

Protein

• Length: 484 a.a.
• Molecular weight: 53867.11 Da
• Isoelectric Point: 4.9665

>NTDB_id=414226 GRX76_RS17680 WP_160154503.1 4280379..4281833(+) (pilR) [Microbulbifer sp. ALW1]
MAERQPIALVVDDEPDICDLISMTLRRMNVRADIAMSVAEANRRLSEKHYDFCLTDMRLPDGDGLQLVEQIQDRPQDQSL
PVAVITAHGNMDTAISALKLGAFDFVSKPVDLERLRALVQLALRLNEDRDIQRQEFPPLLQGQSPAIQQLRSQIEKIARS
DAPVHIQGEPGSGKELTARSIHLQGPRADNAFAILHCAATPAEQLERALFGIDKATEKTEGVLHTANGGTLFLDEITELP
LELQVKLLAAIQEKRFAPVGSSEFSELDIRILSASHKHLVSEVRSGRFRSDLFYRINVIEVAVPALRHRLEDLPLLTRNL
LRRLTADSKGAPPKAAQDAVSALQAYDFPGNLRELENILERALTLCESNTLRASDLLLHAESPIPIPESGDTSSYPVADL
AYVPPRSHEQPTTQIGTLATTTTYPEQFSASDYETLDDFLQTIEREAIESALNETRWNRTAAAEKLGISFRSLRYRLKKL
NLED

Nucleotide

• Length: 1455 bp

>NTDB_id=414226 GRX76_RS17680 WP_160154503.1 4280379..4281833(+) (pilR) [Microbulbifer sp. ALW1]
ATGGCCGAGCGACAACCGATTGCCCTGGTTGTAGATGACGAGCCCGACATCTGCGACTTGATCTCAATGACTCTGCGACG
CATGAACGTGCGCGCGGATATCGCGATGTCTGTCGCCGAAGCTAATCGTCGCCTCAGTGAAAAACATTACGATTTCTGTC
TTACGGATATGCGCCTGCCCGATGGCGATGGCCTGCAACTCGTAGAGCAGATTCAGGATCGCCCTCAGGATCAATCTCTC
CCTGTCGCCGTCATTACCGCCCATGGCAATATGGATACCGCCATTAGCGCACTCAAGCTCGGAGCCTTTGACTTTGTCAG
CAAACCCGTCGACCTGGAGCGATTGCGCGCGCTGGTACAACTGGCCCTGCGACTAAATGAAGACCGCGATATCCAGCGGC
AGGAGTTTCCGCCGCTGCTGCAGGGGCAATCCCCAGCCATTCAGCAACTGCGTTCACAGATAGAAAAAATAGCCCGCAGT
GACGCCCCGGTACATATCCAGGGCGAACCCGGTTCCGGTAAAGAACTGACTGCTCGCAGTATTCATCTCCAGGGGCCAAG
GGCCGACAATGCATTCGCAATACTGCATTGCGCCGCCACTCCGGCAGAGCAACTTGAAAGAGCATTATTCGGAATAGACA
AAGCGACGGAAAAAACCGAAGGCGTTTTGCACACTGCCAACGGTGGCACGCTGTTCCTGGATGAAATTACTGAATTGCCG
CTTGAGCTTCAGGTCAAGCTGCTCGCGGCAATACAGGAAAAGCGTTTTGCTCCGGTCGGTAGTAGCGAGTTCAGCGAGCT
CGATATCCGCATCCTGAGTGCCTCGCACAAACACCTGGTCAGTGAAGTGCGCAGCGGCCGCTTTCGCAGCGACCTGTTTT
ACCGTATCAACGTCATAGAAGTAGCCGTTCCCGCACTGCGCCATCGGCTTGAAGACCTCCCGCTACTGACACGTAACCTC
CTGCGCCGCCTGACGGCAGATAGCAAGGGGGCGCCCCCGAAAGCAGCCCAGGATGCGGTCAGTGCGCTGCAGGCGTACGA
CTTCCCTGGCAACCTCCGTGAGCTGGAAAACATCCTCGAGCGGGCCCTCACGCTCTGCGAAAGCAACACCCTCAGAGCCA
GTGATCTACTACTGCACGCAGAGAGCCCCATCCCCATCCCCGAGTCCGGTGATACCAGCAGCTACCCGGTGGCCGACCTG
GCATATGTACCGCCCAGAAGCCACGAACAACCGACCACTCAAATTGGGACCTTAGCGACGACCACTACCTACCCCGAACA
GTTTTCCGCCTCGGACTACGAAACGTTGGATGACTTCCTGCAAACCATCGAGCGCGAAGCCATAGAAAGTGCACTTAATG
AAACTCGCTGGAACAGGACTGCCGCGGCGGAGAAGTTGGGGATCAGTTTTCGGTCGTTGCGGTATCGTTTGAAAAAACTA
AACCTCGAAGATTAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (9-119)

• Bacterial regulatory protein, Fis family (HTH_8) (440-480)

• Sigma-54 interaction domain (Sigma54_activat) (141-301)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	49.38	100	0.494
pilR	Acinetobacter baumannii strain A118	44.807	100	0.455