Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   HMPREF0833_RS07235 Genome accession   NC_015678
Coordinates   1586599..1587360 (+) Length   253 a.a.
NCBI ID   WP_013904368.1    Uniprot ID   A0AAW7P3V2
Organism   Streptococcus parasanguinis ATCC 15912     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1581599..1592360
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HMPREF0833_RS07210 (HMPREF0833_11470) comE/comE2 1582103..1582861 (-) 759 WP_003018434.1 response regulator transcription factor Regulator
  HMPREF0833_RS07215 (HMPREF0833_11471) - 1582858..1584198 (-) 1341 WP_041818394.1 GHKL domain-containing protein -
  HMPREF0833_RS07225 (HMPREF0833_11472) rlmH 1584662..1585141 (-) 480 WP_003009233.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  HMPREF0833_RS07230 (HMPREF0833_11473) htrA 1585346..1586527 (+) 1182 WP_013904367.1 S1C family serine protease Regulator
  HMPREF0833_RS07235 (HMPREF0833_11474) spo0J 1586599..1587360 (+) 762 WP_013904368.1 ParB/RepB/Spo0J family partition protein Regulator
  HMPREF0833_RS07240 (HMPREF0833_11475) dnaA 1587627..1588985 (+) 1359 WP_003018430.1 chromosomal replication initiator protein DnaA -
  HMPREF0833_RS07245 (HMPREF0833_11476) dnaN 1589144..1590280 (+) 1137 WP_013904369.1 DNA polymerase III subunit beta -
  HMPREF0833_RS07250 (HMPREF0833_11477) - 1590293..1590484 (+) 192 WP_003018426.1 DUF951 domain-containing protein -
  HMPREF0833_RS07255 (HMPREF0833_11478) - 1590520..1591017 (-) 498 WP_003018398.1 DUF1307 domain-containing protein -
  HMPREF0833_RS07260 (HMPREF0833_11479) ychF 1591195..1592310 (+) 1116 WP_003009244.1 redox-regulated ATPase YchF -

Sequence

Protein


Download         Length: 253 a.a.        Molecular weight: 29373.98 Da        Isoelectric Point: 9.7230

>NTDB_id=41394 HMPREF0833_RS07235 WP_013904368.1 1586599..1587360(+) (spo0J) [Streptococcus parasanguinis ATCC 15912]
MEKLEKIAVKDIRTNPFQPRKVFDQEKLEELAQSIKENGLIQPIIVRKSPIIGFELLAGERRFRASKIAGLELVPAIIKE
LTDQEMMRQAIIENLQREDLNPIEEAISYQKLVDHGYKHDQIAQFMGKSRPYISNMLRLLHLAPSVQEAVIQNDISSAHA
RVLVPLDEKEQCFWLERIKQDHLNVRTLENKISSKRKQKNKRVKENFLLEEEQRLKKILGTDVTIHSSSQNKGTIQISFS
SLDEYQRIINSLK

Nucleotide


Download         Length: 762 bp        

>NTDB_id=41394 HMPREF0833_RS07235 WP_013904368.1 1586599..1587360(+) (spo0J) [Streptococcus parasanguinis ATCC 15912]
ATGGAAAAATTAGAAAAGATAGCGGTAAAGGACATTCGAACTAATCCTTTCCAACCAAGAAAAGTATTTGATCAAGAAAA
ATTAGAAGAACTGGCTCAGTCAATAAAAGAAAATGGCTTAATTCAACCCATTATTGTCAGAAAATCTCCAATAATTGGTT
TTGAATTGCTTGCAGGTGAAAGACGTTTTAGAGCTTCAAAAATTGCTGGATTAGAGCTTGTTCCTGCGATTATTAAAGAG
TTAACGGATCAAGAAATGATGCGACAAGCCATTATCGAAAATCTTCAACGAGAAGATCTCAATCCAATCGAAGAAGCTAT
ATCCTACCAGAAACTAGTTGATCATGGCTATAAGCACGACCAAATCGCTCAATTTATGGGAAAATCTAGACCCTATATCA
GCAATATGCTTCGCTTGTTACATCTAGCTCCCTCTGTTCAAGAAGCAGTCATTCAAAATGATATTTCTTCGGCTCACGCT
CGTGTTCTTGTTCCTCTTGATGAAAAAGAGCAATGCTTTTGGTTGGAGCGAATCAAACAGGATCATTTAAATGTTCGAAC
ATTAGAAAACAAGATCAGTTCAAAAAGAAAACAGAAAAATAAAAGAGTAAAAGAAAACTTCCTACTAGAAGAGGAACAAC
GATTGAAAAAAATATTAGGAACAGATGTGACGATACACTCCTCTTCTCAAAATAAAGGAACTATCCAAATTTCTTTTTCA
AGTCTTGATGAATACCAACGAATTATCAACAGCCTCAAATAA

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(144-193)

ParB/Sulfiredoxin domain (ParB_N)

(6-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

49.012

100

0.49

Multiple sequence alignment