Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   HMPREF0833_RS04485 Genome accession   NC_015678
Coordinates   938516..939520 (-) Length   334 a.a.
NCBI ID   WP_041818325.1    Uniprot ID   A0AAW7P2X5
Organism   Streptococcus parasanguinis ATCC 15912     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 933516..944520
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HMPREF0833_RS04470 (HMPREF0833_10905) thrS 933755..935698 (-) 1944 WP_013903910.1 threonine--tRNA ligase -
  HMPREF0833_RS04475 (HMPREF0833_10906) - 936052..937374 (-) 1323 WP_013903911.1 glycosyltransferase family 4 protein -
  HMPREF0833_RS04480 (HMPREF0833_10907) - 937376..938374 (-) 999 WP_013903912.1 glycosyltransferase family 4 protein -
  HMPREF0833_RS04485 (HMPREF0833_10908) ccpA 938516..939520 (-) 1005 WP_041818325.1 catabolite control protein A Regulator
  HMPREF0833_RS04490 (HMPREF0833_10909) - 939681..940763 (+) 1083 WP_013903914.1 Xaa-Pro peptidase family protein -
  HMPREF0833_RS04495 (HMPREF0833_10910) - 941414..943174 (+) 1761 WP_041818327.1 LPXTG cell wall anchor domain-containing protein -
  HMPREF0833_RS04500 (HMPREF0833_10912) - 943422..943871 (-) 450 WP_013903917.1 Rrf2 family transcriptional regulator -

Sequence

Protein


Download         Length: 334 a.a.        Molecular weight: 37118.15 Da        Isoelectric Point: 6.7730

>NTDB_id=41381 HMPREF0833_RS04485 WP_041818325.1 938516..939520(-) (ccpA) [Streptococcus parasanguinis ATCC 15912]
MNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIERLDYRPNAVARGLASKKTTTVGVVIPNITNSYFS
TLAKGIDDIAEMYKYNIVLANSDEDDDKEVSVVNNLFSKQVDGIIFMGYHLTEKIRSEFSRSRTPVVLAGTVDVEHQLPS
VNIDYKQATVDAVTQLAKHNKKIAFVSGPLVDDINGKIRLSGYKEALKAKKLSYSEGLVFESKYRYDEGYNLAERIIASK
ATAAFVTGDELAAGLLNGLSDHGIRVPEDFEIITSDDSQVTRYTRPNLSTIGQPLYDLGAISMRMLTKIMHKEELEEREV
LLSHTINQRGTTKK

Nucleotide


Download         Length: 1005 bp        

>NTDB_id=41381 HMPREF0833_RS04485 WP_041818325.1 938516..939520(-) (ccpA) [Streptococcus parasanguinis ATCC 15912]
ATGAATACAGACGATACAGTAACGATTTATGATGTCGCCCGTGAAGCAGGGGTTTCAATGGCAACCGTTAGTCGTGTAGT
AAATGGAAATAAAAATGTTAAAGAAAATACACGAAAAAAAGTTCTGGAAGTGATCGAACGTTTAGACTATCGTCCAAACG
CCGTTGCACGTGGTCTTGCCAGCAAGAAAACAACAACAGTAGGTGTTGTTATTCCAAATATTACCAATAGTTATTTCTCT
ACATTGGCTAAAGGGATTGATGATATTGCAGAAATGTACAAGTACAACATTGTTCTTGCAAATAGCGATGAAGACGATGA
CAAAGAAGTTTCAGTGGTAAACAACCTCTTTTCAAAACAAGTGGATGGGATCATTTTCATGGGTTATCACTTGACTGAAA
AAATTCGCTCAGAATTTTCACGCTCTCGGACACCAGTTGTCCTTGCTGGGACAGTGGATGTTGAACACCAATTACCAAGT
GTCAATATCGACTACAAGCAAGCAACCGTTGATGCTGTTACACAGTTGGCAAAACACAACAAGAAAATTGCTTTTGTAAG
CGGCCCATTGGTGGACGATATCAATGGAAAAATTCGTTTGTCAGGCTATAAGGAAGCTTTGAAAGCAAAAAAATTGAGCT
ATAGCGAAGGGCTTGTGTTTGAATCCAAGTACCGTTACGATGAAGGTTACAACTTGGCAGAACGAATCATTGCGTCAAAA
GCAACAGCTGCTTTTGTGACAGGTGATGAATTGGCTGCAGGTCTCTTGAACGGCTTGTCTGATCACGGTATCAGAGTACC
AGAAGATTTCGAAATTATTACCAGTGATGATTCACAAGTAACCCGATATACGCGTCCAAATCTATCAACAATTGGACAAC
CCTTGTATGACCTTGGTGCGATCAGTATGCGCATGTTGACTAAGATCATGCACAAAGAAGAGTTGGAAGAACGCGAAGTG
TTGTTGTCTCATACGATCAACCAACGTGGAACGACCAAAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, lacI family (LacI)

(8-53)

Periplasmic binding protein-like domain (Peripla_BP_3)

(180-332)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

91.018

100

0.91
  ccpA Streptococcus pneumoniae D39

85.03

100

0.85
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

56.193

99.102

0.557

Multiple sequence alignment