Detailed information
Bioinformatically predicted
Overview
| Name | pilU | Type | Machinery gene |
| Locus tag | GTQ55_RS16870 | Genome accession | NZ_CP047491 |
| Coordinates | 4003638..4004786 (+) | Length | 382 a.a. |
| NCBI ID | WP_161859777.1 | Uniprot ID | A0A6P1TFS4 |
| Organism | Microbulbifer hydrolyticus strain IRE-31 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3998638..4009786
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GTQ55_RS16850 (GTQ55_16860) | - | 4000354..4000959 (-) | 606 | WP_161859774.1 | YggT family protein | - |
| GTQ55_RS16855 (GTQ55_16865) | proC | 4000971..4001798 (-) | 828 | WP_237567739.1 | pyrroline-5-carboxylate reductase | - |
| GTQ55_RS16860 (GTQ55_16870) | - | 4001825..4002520 (-) | 696 | WP_161859775.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| GTQ55_RS16865 (GTQ55_16875) | pilT | 4002602..4003636 (+) | 1035 | WP_161859776.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| GTQ55_RS16870 (GTQ55_16880) | pilU | 4003638..4004786 (+) | 1149 | WP_161859777.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
| GTQ55_RS16875 (GTQ55_16885) | - | 4004886..4006577 (+) | 1692 | WP_161859778.1 | amidohydrolase | - |
| GTQ55_RS16880 (GTQ55_16890) | - | 4006603..4007367 (-) | 765 | WP_202620642.1 | LytR/AlgR family response regulator transcription factor | - |
| GTQ55_RS16885 (GTQ55_16895) | - | 4007364..4008566 (-) | 1203 | WP_161859779.1 | sensor histidine kinase | - |
Sequence
Protein
Download Length: 382 a.a. Molecular weight: 42522.72 Da Isoelectric Point: 6.0949
>NTDB_id=413792 GTQ55_RS16870 WP_161859777.1 4003638..4004786(+) (pilU) [Microbulbifer hydrolyticus strain IRE-31]
MEIERLLQLVTEKGASDLFITAGVPASIKLHGKIAPVSTSPLTPEKAREMVVSIMNDRQKKEFAENKELNFAISVRNVGR
FRVSAFFQRNLVGMVLRRIETKIPTIDGLGLPEQLKELAMTKRGLIIFVGATGTGKSTSLASMIGHRNENSKGHIISIED
PIEFIHQHRGCIVTQREVGLDTESFETALKNTLRQAPDVILIGEVRSRETMDHAIAFAETGHLCLCTLHANNANQALDRI
IHFFPADRHQQLWMDLSLNLQAMVAQQLVPTPDGDGRRACLEIMINTPLMSDLIRKGEVHKMKELMKRSTEQGMQTFDQA
LYELYDRGEITYEDALAHADSANDLRLMIKLKSESDAEYLNSAADELSLASDTDSGGGPQIY
MEIERLLQLVTEKGASDLFITAGVPASIKLHGKIAPVSTSPLTPEKAREMVVSIMNDRQKKEFAENKELNFAISVRNVGR
FRVSAFFQRNLVGMVLRRIETKIPTIDGLGLPEQLKELAMTKRGLIIFVGATGTGKSTSLASMIGHRNENSKGHIISIED
PIEFIHQHRGCIVTQREVGLDTESFETALKNTLRQAPDVILIGEVRSRETMDHAIAFAETGHLCLCTLHANNANQALDRI
IHFFPADRHQQLWMDLSLNLQAMVAQQLVPTPDGDGRRACLEIMINTPLMSDLIRKGEVHKMKELMKRSTEQGMQTFDQA
LYELYDRGEITYEDALAHADSANDLRLMIKLKSESDAEYLNSAADELSLASDTDSGGGPQIY
Nucleotide
Download Length: 1149 bp
>NTDB_id=413792 GTQ55_RS16870 WP_161859777.1 4003638..4004786(+) (pilU) [Microbulbifer hydrolyticus strain IRE-31]
ATGGAAATCGAACGACTCCTACAATTGGTCACCGAGAAAGGCGCGTCCGACCTGTTCATCACCGCCGGTGTGCCCGCCTC
CATCAAGCTCCACGGCAAGATCGCCCCTGTCAGCACCTCGCCTCTGACCCCGGAAAAAGCCCGGGAAATGGTCGTCAGCA
TCATGAACGACCGTCAGAAGAAAGAGTTCGCCGAGAACAAGGAGCTCAACTTCGCTATCTCCGTGCGCAACGTTGGCCGC
TTCCGGGTATCCGCCTTCTTCCAGCGCAACCTGGTCGGCATGGTGCTGCGTCGGATCGAGACCAAGATCCCGACCATCGA
CGGACTCGGCCTGCCCGAGCAGCTGAAAGAACTGGCCATGACCAAGCGCGGCCTGATCATTTTTGTGGGCGCGACCGGTA
CCGGTAAATCCACCTCGCTCGCTTCCATGATTGGCCACCGCAATGAAAACTCGAAGGGTCACATCATCTCCATCGAAGAC
CCGATCGAATTCATTCACCAGCACCGCGGCTGTATCGTGACCCAGCGTGAGGTCGGCCTCGACACCGAATCGTTTGAGAC
CGCACTGAAAAACACCCTGCGTCAGGCGCCCGACGTTATCCTCATTGGTGAGGTGCGCTCCCGCGAGACCATGGACCACG
CCATCGCCTTCGCCGAAACCGGCCACCTGTGCCTGTGTACCCTGCACGCCAACAACGCCAACCAGGCGCTGGACCGGATC
ATCCACTTCTTCCCCGCTGACCGTCACCAGCAACTGTGGATGGACCTGTCCCTCAACCTCCAGGCCATGGTCGCGCAGCA
GCTGGTACCCACGCCGGACGGCGACGGCCGCCGTGCCTGTCTCGAAATCATGATCAACACCCCGCTGATGTCGGACCTGA
TCCGCAAGGGCGAGGTGCACAAAATGAAGGAGCTGATGAAACGCTCCACCGAACAGGGCATGCAGACCTTTGACCAGGCA
CTGTACGAACTCTACGACCGCGGCGAAATCACCTACGAAGACGCCCTCGCCCACGCCGACTCCGCCAACGACCTGCGCCT
GATGATCAAGCTCAAGTCCGAATCCGACGCCGAGTACCTCAACAGCGCCGCCGACGAACTGAGCCTCGCCAGCGATACCG
ATAGTGGCGGCGGTCCGCAGATTTACTGA
ATGGAAATCGAACGACTCCTACAATTGGTCACCGAGAAAGGCGCGTCCGACCTGTTCATCACCGCCGGTGTGCCCGCCTC
CATCAAGCTCCACGGCAAGATCGCCCCTGTCAGCACCTCGCCTCTGACCCCGGAAAAAGCCCGGGAAATGGTCGTCAGCA
TCATGAACGACCGTCAGAAGAAAGAGTTCGCCGAGAACAAGGAGCTCAACTTCGCTATCTCCGTGCGCAACGTTGGCCGC
TTCCGGGTATCCGCCTTCTTCCAGCGCAACCTGGTCGGCATGGTGCTGCGTCGGATCGAGACCAAGATCCCGACCATCGA
CGGACTCGGCCTGCCCGAGCAGCTGAAAGAACTGGCCATGACCAAGCGCGGCCTGATCATTTTTGTGGGCGCGACCGGTA
CCGGTAAATCCACCTCGCTCGCTTCCATGATTGGCCACCGCAATGAAAACTCGAAGGGTCACATCATCTCCATCGAAGAC
CCGATCGAATTCATTCACCAGCACCGCGGCTGTATCGTGACCCAGCGTGAGGTCGGCCTCGACACCGAATCGTTTGAGAC
CGCACTGAAAAACACCCTGCGTCAGGCGCCCGACGTTATCCTCATTGGTGAGGTGCGCTCCCGCGAGACCATGGACCACG
CCATCGCCTTCGCCGAAACCGGCCACCTGTGCCTGTGTACCCTGCACGCCAACAACGCCAACCAGGCGCTGGACCGGATC
ATCCACTTCTTCCCCGCTGACCGTCACCAGCAACTGTGGATGGACCTGTCCCTCAACCTCCAGGCCATGGTCGCGCAGCA
GCTGGTACCCACGCCGGACGGCGACGGCCGCCGTGCCTGTCTCGAAATCATGATCAACACCCCGCTGATGTCGGACCTGA
TCCGCAAGGGCGAGGTGCACAAAATGAAGGAGCTGATGAAACGCTCCACCGAACAGGGCATGCAGACCTTTGACCAGGCA
CTGTACGAACTCTACGACCGCGGCGAAATCACCTACGAAGACGCCCTCGCCCACGCCGACTCCGCCAACGACCTGCGCCT
GATGATCAAGCTCAAGTCCGAATCCGACGCCGAGTACCTCAACAGCGCCGCCGACGAACTGAGCCTCGCCAGCGATACCG
ATAGTGGCGGCGGTCCGCAGATTTACTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilU | Pseudomonas stutzeri DSM 10701 |
75.332 |
98.691 |
0.743 |
| pilU | Acinetobacter baylyi ADP1 |
66.947 |
93.455 |
0.626 |
| pilU | Vibrio cholerae strain A1552 |
55.618 |
93.194 |
0.518 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
44.543 |
88.743 |
0.395 |
| pilT | Legionella pneumophila strain Lp02 |
42.687 |
87.696 |
0.374 |
| pilT | Legionella pneumophila strain ERS1305867 |
42.687 |
87.696 |
0.374 |
| pilT | Pseudomonas aeruginosa PAK |
41.493 |
87.696 |
0.364 |
| pilT | Acinetobacter nosocomialis M2 |
41.493 |
87.696 |
0.364 |
| pilT | Acinetobacter baumannii D1279779 |
41.493 |
87.696 |
0.364 |
| pilT | Acinetobacter baumannii strain A118 |
41.493 |
87.696 |
0.364 |