Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   FHE72_RS08125 Genome accession   NZ_CP047394
Coordinates   1563870..1564838 (+) Length   322 a.a.
NCBI ID   WP_034763433.1    Uniprot ID   A0A6I6URB0
Organism   Rossellomorea vietnamensis strain 151-6     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1558870..1569838
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FHE72_RS08100 (FHE72_08100) - 1558925..1559104 (+) 180 WP_034763424.1 YjzC family protein -
  FHE72_RS08105 (FHE72_08105) clpB 1559227..1561818 (+) 2592 WP_159361743.1 ATP-dependent chaperone ClpB -
  FHE72_RS08110 (FHE72_08110) - 1561853..1562020 (-) 168 WP_350448850.1 YjzD family protein -
  FHE72_RS08115 (FHE72_08115) - 1562283..1563026 (+) 744 WP_034763429.1 hypothetical protein -
  FHE72_RS08120 (FHE72_08120) - 1563049..1563768 (+) 720 WP_034763430.1 hypothetical protein -
  FHE72_RS08125 (FHE72_08125) med 1563870..1564838 (+) 969 WP_034763433.1 BMP family ABC transporter substrate-binding protein Regulator
  FHE72_RS08130 (FHE72_08130) comZ 1564835..1565023 (+) 189 WP_034763435.1 ComZ family protein Regulator
  FHE72_RS08135 (FHE72_08135) - 1565241..1566173 (+) 933 WP_159361745.1 beta-ketoacyl-ACP synthase III -
  FHE72_RS08140 (FHE72_08140) fabF 1566225..1567469 (+) 1245 WP_061811162.1 beta-ketoacyl-ACP synthase II -
  FHE72_RS08145 (FHE72_08145) - 1568135..1568896 (+) 762 WP_159361746.1 DUF2268 domain-containing putative Zn-dependent protease -
  FHE72_RS08150 (FHE72_08150) - 1569033..1569242 (+) 210 WP_034763443.1 hypothetical protein -

Sequence

Protein


Download         Length: 322 a.a.        Molecular weight: 35970.18 Da        Isoelectric Point: 4.4614

>NTDB_id=413246 FHE72_RS08125 WP_034763433.1 1563870..1564838(+) (med) [Rossellomorea vietnamensis strain 151-6]
MNKKWYMFFLIVFLVGLSGCSAGNSEEIEKVGLLVPEAVNDGVWGTKGYKGLLKIQSDYHADVFYKEGMKNDTSIKQAVE
EFDDKDVTLVFGHGSEYADVFNDLSGEHPNMHFVSFNGHATEKNTTSLQFKGYAMGFFGGMTAAFHSKTKKIGVIAAFEW
QPEVQGFIDGAKYQNSETEVKVEYTNHWDDQERALNELDTLLNEDIDVVYPAGDGYNVAVIEKLKEKGLYAIGYVSDQSD
LGESTVLTSTVQQADKLYAVVAERFAHDELESGNLEFDFEDGVISMGKFSPVIPKDFQSEMKQHIKEYIDSGKLPNGKES
KQ

Nucleotide


Download         Length: 969 bp        

>NTDB_id=413246 FHE72_RS08125 WP_034763433.1 1563870..1564838(+) (med) [Rossellomorea vietnamensis strain 151-6]
ATGAATAAGAAATGGTACATGTTTTTCCTGATTGTATTCCTGGTCGGACTAAGTGGTTGTTCAGCAGGGAACAGCGAAGA
GATAGAAAAGGTTGGTTTACTTGTTCCGGAAGCAGTGAATGATGGAGTTTGGGGAACAAAAGGTTACAAAGGATTACTAA
AAATACAATCCGATTATCATGCAGACGTGTTCTATAAAGAGGGAATGAAGAATGATACATCAATCAAGCAGGCAGTAGAG
GAATTTGATGATAAGGATGTCACCTTAGTATTTGGACATGGAAGTGAGTATGCGGATGTCTTTAACGACTTGTCAGGAGA
GCATCCCAATATGCATTTCGTCAGCTTTAACGGACATGCCACGGAGAAAAACACGACAAGCCTACAGTTCAAGGGGTACG
CTATGGGCTTTTTCGGAGGAATGACAGCAGCCTTTCACTCTAAAACGAAAAAGATCGGTGTGATTGCGGCCTTCGAGTGG
CAGCCGGAAGTTCAAGGGTTTATAGATGGAGCGAAGTATCAAAACAGTGAGACAGAGGTTAAAGTAGAGTACACCAATCA
TTGGGACGATCAAGAGAGGGCCCTTAACGAGTTGGACACTTTACTAAACGAGGATATCGATGTTGTTTATCCTGCAGGTG
ACGGCTATAATGTAGCTGTAATCGAAAAGCTTAAGGAAAAAGGACTGTATGCCATAGGGTACGTATCCGATCAATCCGAT
CTCGGGGAATCAACGGTCCTGACAAGCACAGTTCAACAGGCAGATAAGTTGTATGCAGTAGTAGCCGAGAGGTTCGCCCA
TGATGAGCTGGAGTCAGGCAACCTGGAATTCGATTTTGAAGACGGTGTGATCTCCATGGGGAAATTCAGTCCAGTCATTC
CAAAAGATTTTCAATCTGAAATGAAGCAACATATCAAGGAATATATTGACTCCGGCAAATTGCCGAATGGAAAGGAATCG
AAGCAATGA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(28-316)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6I6URB0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

54.747

98.137

0.537

Multiple sequence alignment