Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   FHE72_RS08130 Genome accession   NZ_CP047394
Coordinates   1564835..1565023 (+) Length   62 a.a.
NCBI ID   WP_034763435.1    Uniprot ID   A0A366EMK4
Organism   Rossellomorea vietnamensis strain 151-6     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1559835..1570023
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FHE72_RS08110 (FHE72_08110) - 1561853..1562020 (-) 168 WP_350448850.1 YjzD family protein -
  FHE72_RS08115 (FHE72_08115) - 1562283..1563026 (+) 744 WP_034763429.1 hypothetical protein -
  FHE72_RS08120 (FHE72_08120) - 1563049..1563768 (+) 720 WP_034763430.1 hypothetical protein -
  FHE72_RS08125 (FHE72_08125) med 1563870..1564838 (+) 969 WP_034763433.1 BMP family ABC transporter substrate-binding protein Regulator
  FHE72_RS08130 (FHE72_08130) comZ 1564835..1565023 (+) 189 WP_034763435.1 ComZ family protein Regulator
  FHE72_RS08135 (FHE72_08135) - 1565241..1566173 (+) 933 WP_159361745.1 beta-ketoacyl-ACP synthase III -
  FHE72_RS08140 (FHE72_08140) fabF 1566225..1567469 (+) 1245 WP_061811162.1 beta-ketoacyl-ACP synthase II -
  FHE72_RS08145 (FHE72_08145) - 1568135..1568896 (+) 762 WP_159361746.1 DUF2268 domain-containing putative Zn-dependent protease -
  FHE72_RS08150 (FHE72_08150) - 1569033..1569242 (+) 210 WP_034763443.1 hypothetical protein -

Sequence

Protein


Download         Length: 62 a.a.        Molecular weight: 7280.37 Da        Isoelectric Point: 4.2508

>NTDB_id=413247 FHE72_RS08130 WP_034763435.1 1564835..1565023(+) (comZ) [Rossellomorea vietnamensis strain 151-6]
MNQDKTMEFMQIAMKYFPQAKEQLDQAGVEFSPEMLQPFMTLFTQVMSEAYELGKQDALHKE

Nucleotide


Download         Length: 189 bp        

>NTDB_id=413247 FHE72_RS08130 WP_034763435.1 1564835..1565023(+) (comZ) [Rossellomorea vietnamensis strain 151-6]
ATGAATCAAGACAAAACAATGGAATTTATGCAAATTGCCATGAAGTATTTCCCTCAAGCGAAAGAACAACTCGATCAAGC
GGGAGTCGAGTTCTCTCCTGAAATGCTGCAGCCATTCATGACGTTGTTCACTCAAGTCATGAGTGAAGCCTATGAATTAG
GCAAACAGGATGCCTTACATAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A366EMK4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

65.517

93.548

0.613

Multiple sequence alignment