Detailed information
Bioinformatically predicted
Overview
| Name | dprB | Type | Machinery gene |
| Locus tag | H4992_RS02615 | Genome accession | NZ_CP059967 |
| Coordinates | 483123..483506 (+) | Length | 127 a.a. |
| NCBI ID | WP_002852281.1 | Uniprot ID | Q9PHN2 |
| Organism | Campylobacter jejuni strain C201 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 478123..488506
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H4992_RS02595 (H4992_02595) | - | 478202..480136 (-) | 1935 | WP_182577096.1 | ribonuclease R family protein | - |
| H4992_RS02600 (H4992_02600) | ilvC | 480255..481277 (+) | 1023 | WP_002873648.1 | ketol-acid reductoisomerase | - |
| H4992_RS02605 (H4992_02605) | - | 481281..482363 (+) | 1083 | WP_182577095.1 | divergent polysaccharide deacetylase family protein | - |
| H4992_RS02610 (H4992_02610) | dprA | 482353..483126 (+) | 774 | WP_002874287.1 | DNA-processing protein DprA | Machinery gene |
| H4992_RS02615 (H4992_02615) | dprB | 483123..483506 (+) | 384 | WP_002852281.1 | Holliday junction resolvase RuvX | Machinery gene |
| H4992_RS02620 (H4992_02620) | - | 483535..484374 (+) | 840 | WP_002866496.1 | RsmB/NOP family class I SAM-dependent RNA methyltransferase | - |
| H4992_RS02625 (H4992_02625) | msrA | 484550..485047 (-) | 498 | WP_002874288.1 | peptide-methionine (S)-S-oxide reductase MsrA | - |
| H4992_RS02630 (H4992_02630) | ppa | 485088..485606 (-) | 519 | WP_002852138.1 | inorganic diphosphatase | - |
| H4992_RS02635 (H4992_02635) | adk | 485616..486194 (-) | 579 | WP_002858481.1 | adenylate kinase | - |
| H4992_RS02640 (H4992_02640) | aspS | 486191..487942 (-) | 1752 | WP_052822853.1 | aspartate--tRNA ligase | - |
Sequence
Protein
Download Length: 127 a.a. Molecular weight: 14088.59 Da Isoelectric Point: 9.5433
>NTDB_id=411900 H4992_RS02615 WP_002852281.1 483123..483506(+) (dprB) [Campylobacter jejuni strain C201]
MRALALDVGLKRIGVALCIDKKIALPLDAVLRKNRNQAANEIKNLLKIHEISLLIVGIPKGGSSEEEMTRRIKHFVSLLE
FDKEICFVDESGTSKEALGYGVANTRKKDGKLDSLSAFIMIKDYFAL
MRALALDVGLKRIGVALCIDKKIALPLDAVLRKNRNQAANEIKNLLKIHEISLLIVGIPKGGSSEEEMTRRIKHFVSLLE
FDKEICFVDESGTSKEALGYGVANTRKKDGKLDSLSAFIMIKDYFAL
Nucleotide
Download Length: 384 bp
>NTDB_id=411900 H4992_RS02615 WP_002852281.1 483123..483506(+) (dprB) [Campylobacter jejuni strain C201]
ATGAGAGCTTTGGCTTTAGATGTAGGTTTAAAACGCATAGGTGTAGCGCTTTGCATAGATAAAAAGATCGCTTTGCCTTT
AGATGCAGTTTTAAGAAAAAATCGCAATCAAGCCGCTAATGAAATCAAAAATTTACTTAAAATACATGAAATTTCTTTAC
TCATTGTAGGCATTCCTAAGGGTGGATCAAGTGAAGAAGAAATGACAAGACGCATTAAGCATTTTGTTTCTTTGCTTGAA
TTTGATAAAGAAATTTGCTTTGTAGATGAAAGCGGAACAAGCAAAGAAGCTTTAGGATACGGCGTAGCCAATACACGTAA
AAAAGATGGTAAATTAGACTCTTTATCCGCTTTTATCATGATAAAGGATTATTTTGCTCTCTAG
ATGAGAGCTTTGGCTTTAGATGTAGGTTTAAAACGCATAGGTGTAGCGCTTTGCATAGATAAAAAGATCGCTTTGCCTTT
AGATGCAGTTTTAAGAAAAAATCGCAATCAAGCCGCTAATGAAATCAAAAATTTACTTAAAATACATGAAATTTCTTTAC
TCATTGTAGGCATTCCTAAGGGTGGATCAAGTGAAGAAGAAATGACAAGACGCATTAAGCATTTTGTTTCTTTGCTTGAA
TTTGATAAAGAAATTTGCTTTGTAGATGAAAGCGGAACAAGCAAAGAAGCTTTAGGATACGGCGTAGCCAATACACGTAA
AAAAGATGGTAAATTAGACTCTTTATCCGCTTTTATCATGATAAAGGATTATTTTGCTCTCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprB | Helicobacter pylori 26695 |
44.882 |
100 |
0.449 |