Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   GSF12_RS01165 Genome accession   NZ_CP047226
Coordinates   249747..250133 (+) Length   128 a.a.
NCBI ID   WP_159374081.1    Uniprot ID   A0A6P1KA53
Organism   Moraxella osloensis strain YV1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type MGE coordinates Gene coordinates Relative position Distance (bp)
IS/Tn 248597..249478 249747..250133 flank 269


Gene organization within MGE regions


Location: 248597..250133
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GSF12_RS01160 (GSF12_01160) - 248597..249478 (-) 882 WP_159374080.1 IS982 family transposase -
  GSF12_RS01165 (GSF12_01165) pilG 249747..250133 (+) 387 WP_159374081.1 twitching motility response regulator PilG Regulator

Sequence

Protein


Download         Length: 128 a.a.        Molecular weight: 14118.28 Da        Isoelectric Point: 4.7501

>NTDB_id=411602 GSF12_RS01165 WP_159374081.1 249747..250133(+) (pilG) [Moraxella osloensis strain YV1]
MDANFEGLKVMIIDDSKTIRRTAEMLLAKAGCDVVTAVDGFDALAKIADSNPDLIFVDIMMPRLDGYQTCSLIKNNADFA
AKPVIMLSSKDGLFDKARGRIVGSDEYLTKPFSKEELFDAIERHRPAS

Nucleotide


Download         Length: 387 bp        

>NTDB_id=411602 GSF12_RS01165 WP_159374081.1 249747..250133(+) (pilG) [Moraxella osloensis strain YV1]
ATGGATGCAAATTTTGAAGGCCTAAAAGTCATGATTATTGACGATTCAAAAACCATTCGTCGTACCGCAGAGATGTTACT
TGCCAAAGCAGGCTGTGACGTGGTTACGGCTGTTGATGGCTTTGATGCGTTGGCAAAAATCGCTGATAGCAACCCAGATT
TGATTTTTGTCGATATCATGATGCCACGACTCGATGGTTATCAGACTTGTTCACTAATCAAAAACAACGCGGATTTTGCT
GCCAAGCCCGTGATTATGCTGTCATCAAAAGATGGCTTGTTTGATAAAGCGCGCGGTCGTATTGTCGGCTCAGATGAGTA
CTTGACCAAACCTTTTAGTAAAGAAGAGCTATTTGACGCCATTGAACGTCATCGTCCTGCGTCTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A6P1KA53

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

72.581

96.875

0.703
  vicR Streptococcus mutans UA159

44.828

90.625

0.406
  chiS Vibrio cholerae strain A1552

37.6

97.656

0.367

Multiple sequence alignment