Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | GQY29_RS04635 | Genome accession | NZ_CP047191 |
| Coordinates | 848967..849485 (+) | Length | 172 a.a. |
| NCBI ID | WP_002951905.1 | Uniprot ID | A0A0P6V0E7 |
| Organism | Streptococcus thermophilus strain EU01 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 843967..854485
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GQY29_RS04605 (GQY29_04605) | - | 844563..844907 (+) | 345 | WP_023909938.1 | hypothetical protein | - |
| GQY29_RS04610 (GQY29_04610) | - | 844894..845121 (+) | 228 | WP_011681629.1 | hypothetical protein | - |
| GQY29_RS04615 (GQY29_04615) | - | 845224..845475 (+) | 252 | WP_023909937.1 | hypothetical protein | - |
| GQY29_RS04620 (GQY29_04620) | mutY | 845802..846953 (-) | 1152 | WP_014727697.1 | A/G-specific adenine glycosylase | - |
| GQY29_RS04625 (GQY29_04625) | - | 847493..848446 (-) | 954 | WP_011681625.1 | hypothetical protein | - |
| GQY29_RS04630 (GQY29_04630) | rpsF | 848665..848955 (+) | 291 | WP_011681624.1 | 30S ribosomal protein S6 | - |
| GQY29_RS04635 (GQY29_04635) | ssb | 848967..849485 (+) | 519 | WP_002951905.1 | single-stranded DNA-binding protein | Machinery gene |
| GQY29_RS04640 (GQY29_04640) | rpsR | 849527..849766 (+) | 240 | WP_002945024.1 | 30S ribosomal protein S18 | - |
| GQY29_RS04645 (GQY29_04645) | - | 849893..850774 (-) | 882 | WP_023909935.1 | DUF4300 family protein | - |
| GQY29_RS04650 (GQY29_04650) | - | 850891..851562 (-) | 672 | WP_011681622.1 | DUF1129 domain-containing protein | - |
| GQY29_RS04655 (GQY29_04655) | - | 851633..852577 (-) | 945 | WP_002951901.1 | magnesium transporter CorA family protein | - |
Sequence
Protein
Download Length: 172 a.a. Molecular weight: 18680.41 Da Isoelectric Point: 4.7482
>NTDB_id=411393 GQY29_RS04635 WP_002951905.1 848967..849485(+) (ssb) [Streptococcus thermophilus strain EU01]
MINNVVLVGRMTRDAELRYTPSNVAVATFSLAVNRNFKGANGERETDFINCVIWRQQAENLANWAKKGALVGITGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRAAREGHSGGSYNVGGFDNSNSFGGGASTGGSFGESQPAQSTPNFGRDESPFGNS
NPMDISDDDLPF
MINNVVLVGRMTRDAELRYTPSNVAVATFSLAVNRNFKGANGERETDFINCVIWRQQAENLANWAKKGALVGITGRIQTR
NYENQQGQRVYVTEVVADNFQMLESRAAREGHSGGSYNVGGFDNSNSFGGGASTGGSFGESQPAQSTPNFGRDESPFGNS
NPMDISDDDLPF
Nucleotide
Download Length: 519 bp
>NTDB_id=411393 GQY29_RS04635 WP_002951905.1 848967..849485(+) (ssb) [Streptococcus thermophilus strain EU01]
ATGATTAATAATGTCGTACTCGTTGGTCGCATGACCCGTGATGCGGAACTTCGTTACACACCAAGTAATGTTGCTGTTGC
AACATTCAGCCTTGCGGTTAATCGTAACTTTAAAGGTGCTAATGGTGAACGTGAAACTGACTTTATTAACTGTGTTATCT
GGCGCCAGCAGGCTGAAAATTTGGCTAACTGGGCTAAGAAAGGTGCATTGGTTGGAATTACAGGTCGTATTCAGACCCGT
AACTATGAAAATCAACAAGGTCAACGTGTTTACGTAACTGAAGTTGTCGCTGATAATTTCCAAATGTTGGAAAGCCGTGC
GGCACGTGAAGGTCATAGTGGTGGTTCATACAACGTTGGAGGATTTGATAATTCAAATTCATTCGGTGGTGGAGCTTCCA
CTGGTGGTTCGTTTGGTGAATCACAACCTGCACAATCTACACCAAACTTCGGTCGTGATGAAAGTCCATTTGGTAATTCA
AATCCAATGGATATTTCAGATGACGATCTTCCATTCTAA
ATGATTAATAATGTCGTACTCGTTGGTCGCATGACCCGTGATGCGGAACTTCGTTACACACCAAGTAATGTTGCTGTTGC
AACATTCAGCCTTGCGGTTAATCGTAACTTTAAAGGTGCTAATGGTGAACGTGAAACTGACTTTATTAACTGTGTTATCT
GGCGCCAGCAGGCTGAAAATTTGGCTAACTGGGCTAAGAAAGGTGCATTGGTTGGAATTACAGGTCGTATTCAGACCCGT
AACTATGAAAATCAACAAGGTCAACGTGTTTACGTAACTGAAGTTGTCGCTGATAATTTCCAAATGTTGGAAAGCCGTGC
GGCACGTGAAGGTCATAGTGGTGGTTCATACAACGTTGGAGGATTTGATAATTCAAATTCATTCGGTGGTGGAGCTTCCA
CTGGTGGTTCGTTTGGTGAATCACAACCTGCACAATCTACACCAAACTTCGGTCGTGATGAAAGTCCATTTGGTAATTCA
AATCCAATGGATATTTCAGATGACGATCTTCCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
58.621 |
100 |
0.593 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
54.301 |
100 |
0.587 |
| ssb | Glaesserella parasuis strain SC1401 |
32.984 |
100 |
0.366 |