Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | VAA_RS02715 | Genome accession | NC_015633 |
| Coordinates | 588703..589296 (+) | Length | 197 a.a. |
| NCBI ID | WP_013855887.1 | Uniprot ID | A0A233HKC5 |
| Organism | Vibrio anguillarum 775 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 583703..594296
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VAA_RS02700 (VAA_02627) | - | 584460..586958 (-) | 2499 | WP_013855884.1 | penicillin-binding protein 1A | - |
| VAA_RS02705 (VAA_02628) | pilM | 587108..588118 (+) | 1011 | WP_013855885.1 | type IV pilus assembly protein PilM | Machinery gene |
| VAA_RS02710 (VAA_02629) | pilN | 588108..588710 (+) | 603 | WP_013855886.1 | PilN domain-containing protein | Machinery gene |
| VAA_RS02715 (VAA_02630) | pilO | 588703..589296 (+) | 594 | WP_013855887.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| VAA_RS02720 (VAA_02631) | pilP | 589283..589804 (+) | 522 | WP_013855888.1 | pilus assembly protein PilP | Machinery gene |
| VAA_RS02725 (VAA_02632) | pilQ | 589828..591543 (+) | 1716 | WP_013855889.1 | type IV pilus secretin PilQ | Machinery gene |
| VAA_RS02730 (VAA_02633) | aroK | 591730..592251 (+) | 522 | WP_010317691.1 | shikimate kinase AroK | - |
| VAA_RS02735 (VAA_02634) | aroB | 592276..593364 (+) | 1089 | WP_026027894.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 197 a.a. Molecular weight: 23039.37 Da Isoelectric Point: 4.3879
>NTDB_id=41132 VAA_RS02715 WP_013855887.1 588703..589296(+) (pilO) [Vibrio anguillarum 775]
MTSFQDLDMDEMAEWPLLPQLLVILVLMLIIQGVGAWFYLMPQNEQLQNLKQQEEVLKSTLRIKASKAATLPQLQAQLDE
LTERYDFLLRQLPVQKELASMLASVNELGLDNALTFTRIDWGEKQNKEFLYRLPLNIELTGNYHDIGDFSEAIAKLPRII
NFDDVDWQRVSQESSTLHFRVRAYTYQFKQEVDDEKQ
MTSFQDLDMDEMAEWPLLPQLLVILVLMLIIQGVGAWFYLMPQNEQLQNLKQQEEVLKSTLRIKASKAATLPQLQAQLDE
LTERYDFLLRQLPVQKELASMLASVNELGLDNALTFTRIDWGEKQNKEFLYRLPLNIELTGNYHDIGDFSEAIAKLPRII
NFDDVDWQRVSQESSTLHFRVRAYTYQFKQEVDDEKQ
Nucleotide
Download Length: 594 bp
>NTDB_id=41132 VAA_RS02715 WP_013855887.1 588703..589296(+) (pilO) [Vibrio anguillarum 775]
ATGACTAGTTTTCAAGATCTTGATATGGATGAAATGGCTGAATGGCCGTTGCTGCCTCAACTGCTGGTTATTTTGGTGTT
GATGCTGATTATTCAAGGCGTTGGCGCGTGGTTCTACCTGATGCCTCAAAATGAGCAATTGCAGAACTTAAAACAGCAAG
AAGAGGTGCTGAAATCGACCTTACGGATTAAGGCCAGCAAAGCCGCCACCTTACCCCAGTTGCAAGCTCAACTGGATGAA
TTAACTGAACGTTATGATTTTTTATTACGCCAATTACCCGTGCAAAAAGAGCTCGCAAGCATGCTCGCATCGGTCAATGA
ACTAGGGCTAGATAACGCGTTAACCTTTACACGTATTGATTGGGGAGAAAAACAGAATAAAGAGTTTCTGTATCGTTTGC
CGCTCAATATCGAATTAACTGGGAATTACCACGACATTGGTGATTTCTCAGAGGCGATCGCGAAATTGCCCCGCATTATT
AATTTCGATGATGTTGATTGGCAACGGGTTAGCCAGGAAAGCAGCACGTTACATTTTAGGGTGCGCGCTTATACCTATCA
ATTCAAGCAAGAGGTGGACGATGAAAAACAATAA
ATGACTAGTTTTCAAGATCTTGATATGGATGAAATGGCTGAATGGCCGTTGCTGCCTCAACTGCTGGTTATTTTGGTGTT
GATGCTGATTATTCAAGGCGTTGGCGCGTGGTTCTACCTGATGCCTCAAAATGAGCAATTGCAGAACTTAAAACAGCAAG
AAGAGGTGCTGAAATCGACCTTACGGATTAAGGCCAGCAAAGCCGCCACCTTACCCCAGTTGCAAGCTCAACTGGATGAA
TTAACTGAACGTTATGATTTTTTATTACGCCAATTACCCGTGCAAAAAGAGCTCGCAAGCATGCTCGCATCGGTCAATGA
ACTAGGGCTAGATAACGCGTTAACCTTTACACGTATTGATTGGGGAGAAAAACAGAATAAAGAGTTTCTGTATCGTTTGC
CGCTCAATATCGAATTAACTGGGAATTACCACGACATTGGTGATTTCTCAGAGGCGATCGCGAAATTGCCCCGCATTATT
AATTTCGATGATGTTGATTGGCAACGGGTTAGCCAGGAAAGCAGCACGTTACATTTTAGGGTGCGCGCTTATACCTATCA
ATTCAAGCAAGAGGTGGACGATGAAAAACAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Vibrio cholerae strain A1552 |
80.612 |
99.492 |
0.802 |
| pilO | Vibrio campbellii strain DS40M4 |
70.37 |
95.939 |
0.675 |