Detailed information NTG0411151

Bioinformatically predicted

Overview

• Name: comGD
• Type: Machinery gene
• Locus tag: GRT15_RS11800
• Genome accession: NZ_CP047157
• Coordinates: 2468407..2468844 (-)
• Length: 145 a.a.
• NCBI ID: WP_015388002.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain FJAT-45028
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2463407..2473844

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GRT15_RS11750 (GRT15_11750)	sinI	2463792..2463965 (+)	174	WP_003153105.1	anti-repressor SinI	Regulator
GRT15_RS11755 (GRT15_11755)	sinR	2463999..2464334 (+)	336	WP_003153104.1	transcriptional regulator SinR	Regulator
GRT15_RS11760 (GRT15_11760)	tasA	2464382..2465167 (-)	786	WP_015388008.1	biofilm matrix protein TasA	-
GRT15_RS11765 (GRT15_11765)	sipW	2465231..2465815 (-)	585	WP_012117977.1	signal peptidase I SipW	-
GRT15_RS11770 (GRT15_11770)	tapA	2465787..2466458 (-)	672	WP_003153099.1	amyloid fiber anchoring/assembly protein TapA	-
GRT15_RS11775 (GRT15_11775)	-	2466717..2467046 (+)	330	WP_003153097.1	DUF3889 domain-containing protein	-
GRT15_RS11780 (GRT15_11780)	-	2467086..2467265 (-)	180	WP_003153093.1	YqzE family protein	-
GRT15_RS11785 (GRT15_11785)	comGG	2467322..2467699 (-)	378	WP_014305410.1	competence type IV pilus minor pilin ComGG	Machinery gene
GRT15_RS11790 (GRT15_11790)	comGF	2467700..2468200 (-)	501	WP_235570156.1	competence type IV pilus minor pilin ComGF	-
GRT15_RS11795 (GRT15_11795)	comGE	2468109..2468423 (-)	315	WP_057080485.1	competence type IV pilus minor pilin ComGE	Machinery gene
GRT15_RS11800 (GRT15_11800)	comGD	2468407..2468844 (-)	438	WP_015388002.1	competence type IV pilus minor pilin ComGD	Machinery gene
GRT15_RS11805 (GRT15_11805)	comGC	2468834..2469142 (-)	309	WP_003153087.1	competence type IV pilus major pilin ComGC	Machinery gene
GRT15_RS11810 (GRT15_11810)	comGB	2469147..2470184 (-)	1038	WP_063174751.1	competence type IV pilus assembly protein ComGB	Machinery gene
GRT15_RS11815 (GRT15_11815)	comGA	2470171..2471241 (-)	1071	WP_044053465.1	competence type IV pilus ATPase ComGA	Machinery gene
GRT15_RS11820 (GRT15_11820)	-	2471433..2472383 (-)	951	WP_014305415.1	magnesium transporter CorA family protein	-
GRT15_RS11825 (GRT15_11825)	-	2472529..2473830 (+)	1302	WP_014305416.1	hemolysin family protein	-

Sequence

Protein

• Length: 145 a.a.
• Molecular weight: 16328.84 Da
• Isoelectric Point: 10.3354

>NTDB_id=411151 GRT15_RS11800 WP_015388002.1 2468407..2468844(-) (comGD) [Bacillus velezensis strain FJAT-45028]
MNNNRRTENGFTLLESLVVLSLTSVLLTVLFTTVPPVCTHLAVRQKTEQLQKDIQLAQETAIAEHKRTKITFLPKEHKYK
LQSSGRIVERSFDSLHITLVTLPESLEFNEKGHPNSGGKIRLKSAGFTYEITVYLGSGNVHAKRK

Nucleotide

• Length: 438 bp

>NTDB_id=411151 GRT15_RS11800 WP_015388002.1 2468407..2468844(-) (comGD) [Bacillus velezensis strain FJAT-45028]
TTGAACAATAACAGGCGGACAGAAAACGGGTTTACCCTTCTTGAAAGCCTGGTTGTGTTAAGCCTGACGTCCGTCCTGCT
GACGGTTTTGTTCACGACGGTTCCGCCGGTCTGCACCCACCTTGCCGTGCGGCAAAAAACAGAACAGCTTCAAAAAGATA
TTCAGCTTGCGCAGGAAACGGCTATCGCAGAACATAAAAGAACAAAAATCACTTTTCTTCCAAAAGAGCATAAATACAAA
CTGCAGTCAAGCGGTAGGATTGTCGAGCGTTCTTTTGATTCACTTCACATTACACTTGTGACTTTACCGGAGAGCCTTGA
ATTTAACGAAAAAGGCCATCCGAATTCGGGAGGAAAGATTCGATTGAAGAGCGCCGGGTTCACCTATGAGATCACAGTTT
ACTTAGGGAGCGGAAATGTCCATGCTAAACGGAAATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (5-31)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD	Bacillus subtilis subsp. subtilis str. 168	54.795	100	0.552