Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   SGPB_RS07525 Genome accession   NC_015600
Coordinates   1526284..1527285 (-) Length   333 a.a.
NCBI ID   WP_013852119.1    Uniprot ID   A0AAW6YHU6
Organism   Streptococcus pasteurianus ATCC 43144     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1521284..1532285
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SGPB_RS07510 (SGPB_1462) thrS 1521560..1523506 (-) 1947 WP_012962255.1 threonine--tRNA ligase -
  SGPB_RS07515 (SGPB_1463) - 1523856..1525190 (-) 1335 WP_013852118.1 glycosyltransferase family 4 protein -
  SGPB_RS07520 (SGPB_1464) - 1525192..1526190 (-) 999 WP_003065799.1 glycosyltransferase family 4 protein -
  SGPB_RS07525 (SGPB_1465) ccpA 1526284..1527285 (-) 1002 WP_013852119.1 catabolite control protein A Regulator
  SGPB_RS07530 (SGPB_1466) - 1527613..1528698 (+) 1086 WP_003065805.1 M24 family metallopeptidase -
  SGPB_RS11190 - 1528814..1529077 (+) 264 WP_230321726.1 hypothetical protein -
  SGPB_RS11005 (SGPB_1467) - 1529225..1529398 (-) 174 WP_230321727.1 hypothetical protein -
  SGPB_RS07540 (SGPB_1468) - 1529580..1530329 (-) 750 WP_013852120.1 ChbG/HpnK family deacetylase -
  SGPB_RS07545 (SGPB_1469) - 1530339..1531742 (-) 1404 WP_013852121.1 PTS transporter subunit EIIC -

Sequence

Protein


Download         Length: 333 a.a.        Molecular weight: 36524.59 Da        Isoelectric Point: 5.0353

>NTDB_id=41087 SGPB_RS07525 WP_013852119.1 1526284..1527285(-) (ccpA) [Streptococcus pasteurianus ATCC 43144]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFS
ILAKGIDDIAAMYKYNIVLASSDEDDDKEVNVVNTLFAKQVDGIIFMGHHLTEKIRAEFSRSRTPVVLAGTVDLEHQLPS
VNIDYKAAVVDVVDILAKSNKEIAFVSGPLIDDINGKVRLAGYKEGLEKNGLSFKEGLVFEANYNYKEGFELAQRVINSG
ATAAFVAEDELAAGLLNGLFEAGKKVPEDFEIITSNDSPITSYTRPNLSSISQPVYDLGAVSMRMLTKIMNKEELEEKEI
LLNHGLITRGTTR

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=41087 SGPB_RS07525 WP_013852119.1 1526284..1527285(-) (ccpA) [Streptococcus pasteurianus ATCC 43144]
ATGAACACTGATGATACGATTACAATTTATGATGTTGCCCGAGAAGCAGGCGTCTCTATGGCAACAGTTAGTCGTGTTGT
AAATGGCAATAAAAACGTAAAGGAAAACACACGTAAAAAAGTTCTTGAAGTTATTGATCGTTTGGATTATCGTCCAAATG
CCGTTGCCCGCGGTTTAGCAAGTAAAAAGACAACAACAGTAGGTGTTGTTATTCCCAATATTGCCAATAGCTATTTCTCA
ATTCTTGCCAAAGGAATTGATGATATTGCCGCTATGTACAAGTATAATATCGTACTTGCTTCAAGTGATGAAGATGATGA
TAAGGAGGTTAACGTTGTTAACACCTTGTTTGCTAAACAAGTTGACGGTATTATCTTCATGGGACATCATTTGACTGAAA
AAATTCGTGCAGAGTTCTCTCGCTCACGCACACCAGTTGTACTTGCGGGTACAGTTGACTTAGAACACCAACTCCCAAGT
GTTAATATTGATTACAAAGCAGCGGTTGTTGATGTTGTTGATATTTTAGCTAAAAGCAATAAAGAAATTGCCTTTGTTTC
TGGTCCACTTATCGATGATATCAACGGTAAAGTGCGTTTAGCTGGTTACAAAGAAGGTCTTGAAAAAAATGGCTTATCAT
TCAAAGAAGGTCTTGTCTTTGAAGCTAATTACAACTATAAAGAAGGATTTGAACTTGCACAACGTGTGATTAATTCTGGC
GCAACAGCAGCCTTTGTTGCCGAAGACGAATTGGCAGCAGGCTTACTGAACGGCTTGTTCGAAGCTGGCAAAAAAGTTCC
AGAAGACTTTGAAATCATCACAAGCAATGATTCACCAATTACATCATACACACGCCCAAACCTTAGCTCAATCAGTCAAC
CAGTTTATGACCTTGGTGCTGTCAGCATGCGTATGTTGACTAAAATCATGAACAAAGAGGAACTTGAAGAAAAAGAAATT
CTTCTTAACCATGGTCTTATAACACGTGGCACAACACGTTAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, lacI family (LacI)

(8-53)

Periplasmic binding protein-like domain (Peripla_BP_3)

(181-332)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

80.18

100

0.802
  ccpA Streptococcus pneumoniae D39

77.778

100

0.778
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

55.891

99.399

0.556

Multiple sequence alignment