Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   SGPB_RS07435 Genome accession   NC_015600
Coordinates   1507944..1508753 (-) Length   269 a.a.
NCBI ID   WP_013852110.1    Uniprot ID   F5X2H3
Organism   Streptococcus pasteurianus ATCC 43144     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1502944..1513753
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SGPB_RS07425 (SGPB_1445) smc 1503333..1506872 (-) 3540 WP_043910269.1 chromosome segregation protein SMC -
  SGPB_RS07430 (SGPB_1446) rnc 1507004..1507690 (-) 687 WP_003065764.1 ribonuclease III -
  SGPB_RS07435 (SGPB_1447) vicX 1507944..1508753 (-) 810 WP_013852110.1 MBL fold metallo-hydrolase Regulator
  SGPB_RS07440 (SGPB_1448) vicK 1508754..1510106 (-) 1353 WP_013852111.1 cell wall metabolism sensor histidine kinase VicK Regulator
  SGPB_RS07445 (SGPB_1449) vicR 1510099..1510809 (-) 711 WP_003065770.1 response regulator YycF Regulator
  SGPB_RS07450 (SGPB_1450) - 1511124..1511888 (+) 765 WP_003065772.1 amino acid ABC transporter ATP-binding protein -
  SGPB_RS07455 (SGPB_1451) - 1511899..1512711 (+) 813 WP_013852112.1 transporter substrate-binding domain-containing protein -
  SGPB_RS07460 (SGPB_1452) - 1512728..1513432 (+) 705 WP_003065775.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30357.39 Da        Isoelectric Point: 5.8277

>NTDB_id=41084 SGPB_RS07435 WP_013852110.1 1507944..1508753(-) (vicX) [Streptococcus pasteurianus ATCC 43144]
MSENAFKYSILASGSTGNSFYVETPQKRFLIDAGLTGKKITSLLAEIDRKPEDLDAIFITHEHSDHIKGVGVLARRYNLD
VYANEKTWQMIDERNMIGKLDFAQKHIFERGKTLTLGDIDIESFGVSHDAVEPQFYRLMKDNKSFVILTDTGYVSDRMAG
IIENADGYLIESNHDVEILRSGAYPWSLKQRILSDKGHLSNEDGAGTMIRTIGNRTKKIYLGHLSKENNIKELAHMTMEN
NLIQADFGIGYDMKVFDTSPEEATPLTKL

Nucleotide


Download         Length: 810 bp        

>NTDB_id=41084 SGPB_RS07435 WP_013852110.1 1507944..1508753(-) (vicX) [Streptococcus pasteurianus ATCC 43144]
ATGTCTGAAAATGCTTTTAAATATAGTATTTTAGCCTCCGGTTCAACTGGAAATTCTTTTTATGTGGAAACACCACAAAA
ACGTTTTTTGATTGATGCGGGTTTGACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCAGAGGACT
TAGATGCTATTTTTATTACACACGAACATTCTGACCATATCAAAGGGGTTGGGGTGTTAGCACGTCGTTATAATCTTGAT
GTTTATGCGAATGAAAAAACGTGGCAAATGATTGATGAGCGAAATATGATTGGAAAGCTTGATTTCGCTCAAAAACATAT
TTTTGAACGTGGTAAAACATTGACACTTGGTGACATTGATATTGAAAGTTTTGGTGTTAGCCACGATGCCGTTGAGCCAC
AATTTTATCGTTTGATGAAAGATAATAAATCGTTTGTTATCTTAACAGATACAGGTTATGTTAGTGACCGCATGGCAGGA
ATTATTGAAAATGCTGACGGTTACTTAATTGAATCAAATCATGATGTTGAGATTTTACGTTCTGGTGCTTATCCGTGGAG
TTTGAAACAACGTATCCTATCTGATAAAGGGCACTTGTCAAACGAAGACGGTGCTGGGACAATGATTCGAACCATTGGAA
ATCGCACGAAGAAAATTTACCTTGGACATTTGAGTAAAGAAAACAATATCAAAGAATTGGCTCACATGACCATGGAAAAT
AATCTTATTCAAGCTGACTTTGGGATTGGTTATGACATGAAAGTCTTTGACACCTCACCAGAGGAAGCAACACCATTAAC
AAAGTTATAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-216)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB F5X2H3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.58

100

0.766

Multiple sequence alignment