Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   GE573_RS11815 Genome accession   NZ_CP047119
Coordinates   2306675..2307628 (+) Length   317 a.a.
NCBI ID   WP_059366593.1    Uniprot ID   -
Organism   Bacillus velezensis strain AK-0     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2301675..2312628
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GE573_RS11790 (GE573_02348) - 2301721..2303154 (+) 1434 WP_165913860.1 HAMP domain-containing sensor histidine kinase -
  GE573_RS11795 (GE573_02349) rapC 2303307..2304455 (+) 1149 WP_007410270.1 Rap family tetratricopeptide repeat protein Regulator
  GE573_RS11800 (GE573_02350) phrC 2304439..2304558 (+) 120 WP_003156334.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  GE573_RS11805 - 2304707..2304817 (-) 111 WP_369719092.1 YjcZ family sporulation protein -
  GE573_RS11810 (GE573_02351) - 2304897..2306261 (-) 1365 WP_190664058.1 aspartate kinase -
  GE573_RS11815 (GE573_02352) ceuB 2306675..2307628 (+) 954 WP_059366593.1 ABC transporter permease Machinery gene
  GE573_RS11820 (GE573_02353) - 2307618..2308565 (+) 948 WP_007410274.1 iron chelate uptake ABC transporter family permease subunit -
  GE573_RS11825 (GE573_02354) - 2308559..2309317 (+) 759 WP_190664059.1 ABC transporter ATP-binding protein -
  GE573_RS11830 (GE573_02355) - 2309339..2310283 (+) 945 WP_063096191.1 siderophore ABC transporter substrate-binding protein -
  GE573_RS11835 (GE573_02356) - 2310325..2311749 (-) 1425 WP_063096193.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34959.26 Da        Isoelectric Point: 9.6741

>NTDB_id=410688 GE573_RS11815 WP_059366593.1 2306675..2307628(+) (ceuB) [Bacillus velezensis strain AK-0]
MKLRYLLLLLAVLACTSIFIGVEDLSPLDIFHLNKEQAGTLFDSRLPRLVSIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLVKMSIAFVFALAGNFLFMKILERIKFNDAIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLLIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLIASLVILTVGM
LPFLGLIIPNMVSIYKGDNLRSSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGVIGSGIFLYMLLRRKAYES

Nucleotide


Download         Length: 954 bp        

>NTDB_id=410688 GE573_RS11815 WP_059366593.1 2306675..2307628(+) (ceuB) [Bacillus velezensis strain AK-0]
ATGAAGCTACGTTACTTACTTTTGCTACTGGCGGTTTTGGCGTGTACTTCTATATTTATCGGTGTAGAAGATTTGTCGCC
GCTGGATATTTTTCATTTAAATAAAGAACAGGCAGGTACATTGTTTGACAGCCGGCTGCCGCGTTTGGTGAGCATTATCA
TCGCCGGCATGAGCCTGAGCATCTGCGGATTAATCATGCAGCAGATCAGCCGGAATAAATTTGTATCGCCGACGACTGCG
GGAACGATGGATTGGGCAAGGCTCGGAATCTTGATTTCATTAATGCTTTTTACGTCAGCGAGTCCGCTTGTGAAAATGTC
TATCGCTTTCGTTTTCGCGTTGGCGGGAAATTTCCTTTTCATGAAAATCCTCGAGAGAATCAAGTTCAATGATGCGATTT
TTATTCCTCTCGTCGGTTTAATGCTTGGGAACATCGTCAGCTCAATCGCCACGTTTATCGCATATAAATATGACCTGATC
CAAAACCTGTCGTCTTGGCTGCAGGGAGATTTCTCACTGGTCGTCAAAGGTCGGTATGAGCTTTTATATCTGAGTATCCC
GCTTTTGATCATCGCTTATGTGTATGCGGATAAATTTACGGTGGCGGGAATGGGAGAGAGTTTTTCCGTCAATCTCGGCC
TGAAATACAAACGCGTCGTTAATATCGGTCTGATTATCGTGTCGCTCATCGCTTCGCTGGTGATCCTGACCGTCGGGATG
CTGCCGTTTCTCGGTTTGATCATTCCCAATATGGTGTCGATTTACAAAGGGGACAACCTGAGGAGCAGCCTGCCTCACAC
CGCTCTGCTGGGCGCTGTTTTTGTGCTGTTTTGCGACATTTTGGGAAGGGTGATCATCTTCCCGTACGAAATTTCCATCG
GCCTGATGGTCGGTGTTATCGGCAGCGGCATCTTCCTGTATATGCTGTTAAGGAGAAAAGCATATGAGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.797

99.685

0.536

Multiple sequence alignment