Detailed information NTG0410686

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: GE573_RS11795
• Genome accession: NZ_CP047119
• Coordinates: 2303307..2304455 (+)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain AK-0
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2298307..2309455

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GE573_RS11775 (GE573_02345)	-	2298704..2299387 (-)	684	WP_098080976.1	ABC transporter ATP-binding protein	-
GE573_RS11780 (GE573_02346)	-	2299402..2300838 (-)	1437	WP_098080977.1	ABC transporter permease	-
GE573_RS11785 (GE573_02347)	-	2301051..2301734 (+)	684	WP_007410267.1	response regulator transcription factor	-
GE573_RS11790 (GE573_02348)	-	2301721..2303154 (+)	1434	WP_165913860.1	HAMP domain-containing sensor histidine kinase	-
GE573_RS11795 (GE573_02349)	rapC	2303307..2304455 (+)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
GE573_RS11800 (GE573_02350)	phrC	2304439..2304558 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
GE573_RS11805	-	2304707..2304817 (-)	111	WP_369719092.1	YjcZ family sporulation protein	-
GE573_RS11810 (GE573_02351)	-	2304897..2306261 (-)	1365	WP_190664058.1	aspartate kinase	-
GE573_RS11815 (GE573_02352)	ceuB	2306675..2307628 (+)	954	WP_059366593.1	ABC transporter permease	Machinery gene
GE573_RS11820 (GE573_02353)	-	2307618..2308565 (+)	948	WP_007410274.1	iron chelate uptake ABC transporter family permease subunit	-
GE573_RS11825 (GE573_02354)	-	2308559..2309317 (+)	759	WP_190664059.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=410686 GE573_RS11795 WP_007410270.1 2303307..2304455(+) (rapC) [Bacillus velezensis strain AK-0]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=410686 GE573_RS11795 WP_007410270.1 2303307..2304455(+) (rapC) [Bacillus velezensis strain AK-0]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGATTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568