Detailed information
Bioinformatically predicted
Overview
| Name | coiA | Type | Machinery gene |
| Locus tag | GPZ88_RS07405 | Genome accession | NZ_CP046919 |
| Coordinates | 1432266..1433228 (+) | Length | 320 a.a. |
| NCBI ID | WP_166043876.1 | Uniprot ID | A0A6G8I133 |
| Organism | Streptococcus ruminicola strain CNU_G2 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 1427266..1438228
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GPZ88_RS07375 (GPZ88_07355) | sodA | 1427440..1428051 (+) | 612 | WP_166043866.1 | superoxide dismutase SodA | - |
| GPZ88_RS07380 (GPZ88_07360) | - | 1428157..1428882 (+) | 726 | WP_166043868.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| GPZ88_RS07385 (GPZ88_07365) | queA | 1428934..1429962 (-) | 1029 | WP_166043870.1 | tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA | - |
| GPZ88_RS07390 (GPZ88_07370) | - | 1430122..1430628 (+) | 507 | WP_033152227.1 | VIT1/CCC1 transporter family protein | - |
| GPZ88_RS07395 (GPZ88_07375) | nagB | 1430763..1431467 (+) | 705 | WP_166043872.1 | glucosamine-6-phosphate deaminase | - |
| GPZ88_RS07400 (GPZ88_07380) | - | 1431500..1432216 (+) | 717 | WP_166043874.1 | pseudouridine synthase | - |
| GPZ88_RS07405 (GPZ88_07385) | coiA | 1432266..1433228 (+) | 963 | WP_166043876.1 | competence protein CoiA | Machinery gene |
| GPZ88_RS07410 (GPZ88_07390) | pepF | 1433228..1435030 (+) | 1803 | WP_166043878.1 | oligoendopeptidase F | Regulator |
| GPZ88_RS07415 (GPZ88_07395) | - | 1435102..1435620 (+) | 519 | WP_166043880.1 | GNAT family N-acetyltransferase | - |
| GPZ88_RS07420 (GPZ88_07400) | - | 1435642..1436253 (+) | 612 | WP_157628832.1 | HAD-IA family hydrolase | - |
| GPZ88_RS07425 (GPZ88_07405) | - | 1436301..1437002 (+) | 702 | WP_074601492.1 | O-methyltransferase | - |
| GPZ88_RS07430 (GPZ88_07410) | - | 1437072..1438142 (+) | 1071 | WP_158913366.1 | peptidyl-prolyl cis-trans isomerase | - |
Sequence
Protein
Download Length: 320 a.a. Molecular weight: 37873.54 Da Isoelectric Point: 9.3649
>NTDB_id=409449 GPZ88_RS07405 WP_166043876.1 1432266..1433228(+) (coiA) [Streptococcus ruminicola strain CNU_G2]
MLSALDENGKLVSLLDEIPKRQAFTCPACHSPVRLRHGQIMRPHFAHVSLQNCDFYSENESDEHLGLKAELYRSISRTDE
VVIEKILPELGQVADLFVNDKLALEVQCSRLSEKRLRQRTISYQNAGYSVLWLLGEKLWLRHHLTPLHRQFLYFSQNMGF
HMWELDLKKSEIRLNYLIYEDLHGQVHYLTKSCAFSADVMAFLRLPYQRQTLSAYQVTQDSKITSYIQKQLIARNSRWLK
RQEEAYLKGKNLLTQSLSEFYPQVKPPEFKEGFCQIKQDLTAFYKIFEDYYQNQGQKRIQMLYPPAYYGRMVNNTQKRRK
MLSALDENGKLVSLLDEIPKRQAFTCPACHSPVRLRHGQIMRPHFAHVSLQNCDFYSENESDEHLGLKAELYRSISRTDE
VVIEKILPELGQVADLFVNDKLALEVQCSRLSEKRLRQRTISYQNAGYSVLWLLGEKLWLRHHLTPLHRQFLYFSQNMGF
HMWELDLKKSEIRLNYLIYEDLHGQVHYLTKSCAFSADVMAFLRLPYQRQTLSAYQVTQDSKITSYIQKQLIARNSRWLK
RQEEAYLKGKNLLTQSLSEFYPQVKPPEFKEGFCQIKQDLTAFYKIFEDYYQNQGQKRIQMLYPPAYYGRMVNNTQKRRK
Nucleotide
Download Length: 963 bp
>NTDB_id=409449 GPZ88_RS07405 WP_166043876.1 1432266..1433228(+) (coiA) [Streptococcus ruminicola strain CNU_G2]
ATGCTGTCTGCGCTTGATGAAAATGGAAAATTAGTTTCTTTGTTAGATGAAATACCGAAACGGCAAGCTTTTACTTGTCC
AGCCTGTCATTCACCAGTTCGACTGAGACATGGTCAGATTATGCGTCCGCATTTTGCTCATGTGTCTTTGCAGAATTGTG
ATTTTTATAGTGAAAATGAAAGTGACGAGCACCTAGGGTTAAAAGCGGAGCTGTATCGCAGCATTTCGCGAACAGATGAA
GTTGTTATTGAAAAGATTTTGCCTGAACTAGGGCAGGTGGCAGATTTATTTGTAAATGATAAGCTAGCTCTTGAGGTGCA
GTGCTCACGTTTATCCGAAAAACGACTTAGACAACGAACGATTTCATATCAAAATGCAGGCTATTCTGTCCTCTGGCTTT
TAGGTGAGAAATTGTGGCTTCGTCATCATTTAACGCCGTTACATCGCCAGTTCCTTTATTTTTCGCAGAATATGGGCTTT
CACATGTGGGAATTAGATTTAAAGAAATCGGAGATACGGCTTAATTATCTTATTTATGAGGATTTGCATGGGCAGGTTCA
TTATTTGACAAAGTCGTGTGCTTTTTCGGCTGATGTCATGGCATTTTTACGACTTCCTTATCAAAGACAAACTTTGTCTG
CATATCAAGTCACTCAAGATTCAAAGATAACGTCTTACATTCAAAAGCAGCTCATCGCTCGAAATTCTCGTTGGTTAAAA
CGTCAAGAAGAGGCATATCTAAAGGGAAAAAATCTCCTTACTCAATCTTTGTCGGAATTTTATCCGCAAGTGAAACCACC
TGAATTTAAGGAAGGATTTTGTCAGATTAAGCAAGATTTGACAGCATTTTACAAGATTTTTGAGGATTATTATCAAAATC
AAGGCCAAAAACGAATTCAAATGCTTTACCCACCAGCATATTATGGTAGAATGGTTAATAATACCCAGAAAAGGAGAAAA
TGA
ATGCTGTCTGCGCTTGATGAAAATGGAAAATTAGTTTCTTTGTTAGATGAAATACCGAAACGGCAAGCTTTTACTTGTCC
AGCCTGTCATTCACCAGTTCGACTGAGACATGGTCAGATTATGCGTCCGCATTTTGCTCATGTGTCTTTGCAGAATTGTG
ATTTTTATAGTGAAAATGAAAGTGACGAGCACCTAGGGTTAAAAGCGGAGCTGTATCGCAGCATTTCGCGAACAGATGAA
GTTGTTATTGAAAAGATTTTGCCTGAACTAGGGCAGGTGGCAGATTTATTTGTAAATGATAAGCTAGCTCTTGAGGTGCA
GTGCTCACGTTTATCCGAAAAACGACTTAGACAACGAACGATTTCATATCAAAATGCAGGCTATTCTGTCCTCTGGCTTT
TAGGTGAGAAATTGTGGCTTCGTCATCATTTAACGCCGTTACATCGCCAGTTCCTTTATTTTTCGCAGAATATGGGCTTT
CACATGTGGGAATTAGATTTAAAGAAATCGGAGATACGGCTTAATTATCTTATTTATGAGGATTTGCATGGGCAGGTTCA
TTATTTGACAAAGTCGTGTGCTTTTTCGGCTGATGTCATGGCATTTTTACGACTTCCTTATCAAAGACAAACTTTGTCTG
CATATCAAGTCACTCAAGATTCAAAGATAACGTCTTACATTCAAAAGCAGCTCATCGCTCGAAATTCTCGTTGGTTAAAA
CGTCAAGAAGAGGCATATCTAAAGGGAAAAAATCTCCTTACTCAATCTTTGTCGGAATTTTATCCGCAAGTGAAACCACC
TGAATTTAAGGAAGGATTTTGTCAGATTAAGCAAGATTTGACAGCATTTTACAAGATTTTTGAGGATTATTATCAAAATC
AAGGCCAAAAACGAATTCAAATGCTTTACCCACCAGCATATTATGGTAGAATGGTTAATAATACCCAGAAAAGGAGAAAA
TGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| coiA | Streptococcus mitis NCTC 12261 |
51.456 |
96.563 |
0.497 |
| coiA | Streptococcus pneumoniae TIGR4 |
50.809 |
96.563 |
0.491 |
| coiA | Streptococcus pneumoniae Rx1 |
50.485 |
96.563 |
0.487 |
| coiA | Streptococcus pneumoniae D39 |
50.485 |
96.563 |
0.487 |
| coiA | Streptococcus pneumoniae R6 |
50.485 |
96.563 |
0.487 |
| coiA | Lactococcus lactis subsp. cremoris KW2 |
42.687 |
100 |
0.447 |