Detailed information NTG0409237

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: GQA94_RS18515
• Genome accession: NZ_CP046902
• Coordinates: 3996951..3999176 (-)
• Length: 741 a.a.
• NCBI ID: WP_199270066.1
• Uniprot ID: -
• Organism: Stutzerimonas stutzeri strain PM101005
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3991951..4004176

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GQA94_RS18480 (GQA94_18485)	murB	3992342..3993361 (-)	1020	WP_158189376.1	UDP-N-acetylmuramate dehydrogenase	-
GQA94_RS18485 (GQA94_18490)	-	3993358..3993822 (-)	465	WP_158189377.1	low molecular weight protein-tyrosine-phosphatase	-
GQA94_RS18490 (GQA94_18495)	kdsB	3993825..3994589 (-)	765	WP_158189378.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
GQA94_RS18495 (GQA94_18500)	-	3994586..3994771 (-)	186	WP_158189379.1	Trm112 family protein	-
GQA94_RS18500 (GQA94_18505)	lpxK	3994818..3995822 (-)	1005	WP_158189380.1	tetraacyldisaccharide 4'-kinase	-
GQA94_RS18505 (GQA94_18510)	-	3995822..3996250 (-)	429	WP_158189381.1	biopolymer transporter ExbD	-
GQA94_RS18510 (GQA94_18515)	-	3996247..3996879 (-)	633	WP_158189382.1	MotA/TolQ/ExbB proton channel family protein	-
GQA94_RS18515 (GQA94_18520)	comA	3996951..3999176 (-)	2226	WP_199270066.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
GQA94_RS18520 (GQA94_18525)	-	3999359..3999874 (+)	516	WP_158189383.1	DUF2062 domain-containing protein	-
GQA94_RS18525 (GQA94_18530)	-	3999880..4001127 (-)	1248	WP_158189384.1	lipoprotein-releasing ABC transporter permease subunit	-
GQA94_RS18530 (GQA94_18535)	lolD	4001127..4001825 (-)	699	WP_158190165.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
GQA94_RS18535 (GQA94_18540)	-	4001833..4003080 (-)	1248	WP_158189385.1	lipoprotein-releasing ABC transporter permease subunit	-
GQA94_RS18540 (GQA94_18545)	-	4003181..4003753 (+)	573	WP_158189386.1	PilZ domain-containing protein	-
GQA94_RS18545 (GQA94_18550)	-	4003757..4004062 (+)	306	WP_158189387.1	phosphodiesterase	-

Sequence

Protein

• Length: 741 a.a.
• Molecular weight: 80504.05 Da
• Isoelectric Point: 10.1806

>NTDB_id=409237 GQA94_RS18515 WP_199270066.1 3996951..3999176(-) (comA) [Stutzerimonas stutzeri strain PM101005]
MRTAMLALAVGLLLLRFVPQLPPLSTLPLLWLTGLALLPLRWRALGCFLCGFGWACLCAHWALEDRLPDELDGRTFWLEG
QVAGLPEISSAVVRFELVDVSSRHAGLPSRVRLAWYGGPAVQAGERWRLAARLKRPRGLVNPQSFDYEAWLLARRIGASG
TVKAGERLSDARGGRAWRDQLRRRLMGVDAQGRSGAIAALVVGDDSGLSPADWRVLQDTGTVHLMVISGQHVGMLAALLY
GLVALLARWGVWPRRVPWLPWACAFALAGALGYGWLAGFEVPVQRACMMVALVLLWRLRFRHLGAWLPLLIALNGVLLMD
PLASLQPGFWLSFAAVGLLVWMFRGRLGRWNAWRSLGRAQWGMTLGLLPVLLALGLPVSLSGPVANLIAVPLVSALIVPL
SLIGTALLWLPSVGESLLWLAGGLLAVLFDGLQWLAHWRSAWLPVSLPLWSGLLVALGTLLILLPAGVPFRALGAVLLAP
LLFPPASSPAAGEAQAWVFDVGQGLAVLVRTRNHAVLYDAGPRYGDFDIGERVVFPSLRALGLADLDLLILSHADSDHAG
GAPAIHRQMQPARVLSGEPEQLPASLGAQGCRSGERWEWDQVRFTLWRWERAEDGNQSSCVLLVEANGERLLLTGDIDAA
AEQALVASGLPHDVRWLLVPHHGSRSASSSAFIEAAGAHGALVSRSLHNAFGHPHADVVQRLRASGAQIFDTAELGALQI
RLGRFETVRGSRAERRFWREK

Nucleotide

• Length: 2226 bp

>NTDB_id=409237 GQA94_RS18515 WP_199270066.1 3996951..3999176(-) (comA) [Stutzerimonas stutzeri strain PM101005]
ATGCGTACGGCGATGCTGGCGCTTGCAGTGGGCCTTTTACTGCTGCGCTTTGTTCCGCAACTGCCACCTTTATCGACGTT
GCCATTGCTGTGGCTGACGGGGCTCGCGCTGCTGCCGTTGCGCTGGCGTGCGCTCGGATGTTTCCTCTGCGGCTTCGGTT
GGGCATGCCTGTGCGCGCATTGGGCATTGGAAGATCGCCTGCCTGACGAGCTCGATGGCCGCACGTTTTGGCTTGAAGGC
CAGGTCGCTGGCCTCCCTGAGATCAGTAGCGCCGTGGTGCGGTTCGAACTGGTGGATGTCTCGTCGCGGCACGCCGGGCT
GCCTTCGCGGGTGCGCCTGGCGTGGTACGGCGGGCCGGCGGTGCAGGCGGGCGAGCGTTGGCGGCTCGCTGCCAGGCTGA
AACGGCCGCGCGGTCTGGTCAATCCGCAGTCTTTCGATTACGAAGCCTGGCTGCTGGCGCGCCGAATAGGCGCCAGTGGC
ACGGTCAAGGCGGGTGAACGGCTCTCGGATGCGCGAGGTGGGCGGGCGTGGCGCGACCAACTGCGTCGGCGGCTGATGGG
GGTGGACGCCCAAGGTCGCTCGGGCGCCATCGCCGCGTTGGTGGTGGGCGATGACAGTGGTCTGTCCCCGGCCGACTGGC
GAGTCCTTCAGGACACCGGAACCGTCCACCTGATGGTGATTTCGGGCCAGCATGTGGGGATGCTGGCGGCATTGCTCTAC
GGCCTGGTGGCATTGCTGGCGCGTTGGGGCGTCTGGCCGCGGCGAGTGCCTTGGCTGCCCTGGGCCTGTGCTTTCGCGCT
GGCGGGGGCGCTGGGGTATGGCTGGCTGGCAGGCTTCGAAGTGCCGGTCCAGCGGGCCTGCATGATGGTCGCCCTGGTGC
TCTTGTGGCGTCTGCGTTTCCGCCATCTGGGCGCATGGCTGCCCTTGCTGATTGCGCTGAACGGCGTTCTGCTGATGGAT
CCACTGGCGAGTCTGCAGCCAGGGTTCTGGCTGTCGTTCGCGGCGGTAGGGCTGCTCGTGTGGATGTTCCGTGGGCGGTT
GGGGCGTTGGAACGCGTGGCGATCGCTGGGCCGCGCGCAGTGGGGCATGACCCTCGGCCTGTTGCCGGTGTTGCTTGCGC
TGGGCTTGCCGGTGAGCCTGAGCGGTCCGGTCGCTAATCTCATCGCGGTTCCATTGGTGAGCGCGCTGATCGTACCGCTG
TCGCTGATCGGCACCGCGCTGCTATGGCTGCCCAGCGTGGGCGAGTCGCTGTTATGGCTGGCCGGCGGGTTGCTGGCGGT
TCTGTTCGACGGATTGCAATGGCTTGCGCACTGGCGGTCTGCCTGGTTGCCGGTCTCGTTGCCGCTTTGGAGCGGGTTGC
TGGTCGCGTTGGGAACGTTGCTGATCCTGCTGCCTGCCGGGGTGCCGTTTCGCGCGCTGGGTGCGGTGCTGCTCGCACCG
TTGTTGTTCCCCCCGGCCAGTAGTCCCGCAGCAGGCGAGGCGCAAGCCTGGGTTTTCGATGTCGGCCAGGGGCTGGCCGT
GCTGGTGCGTACGCGCAACCACGCCGTGTTGTACGACGCAGGGCCGCGCTACGGCGACTTCGATATCGGAGAACGGGTCG
TGTTTCCATCGTTGCGGGCGCTGGGATTGGCCGATCTCGATCTGCTGATCCTCAGCCATGCCGATAGCGATCATGCCGGC
GGCGCCCCGGCGATACACCGGCAGATGCAGCCCGCGCGAGTACTCAGCGGTGAACCGGAGCAGTTGCCCGCTTCGCTGGG
TGCCCAAGGGTGCCGCTCGGGCGAGCGCTGGGAATGGGACCAGGTCCGCTTTACGCTCTGGCGCTGGGAGCGGGCCGAGG
ACGGCAACCAGTCATCCTGTGTGCTGCTGGTCGAGGCGAACGGCGAACGGCTGCTGCTCACCGGTGACATCGATGCGGCG
GCCGAGCAGGCATTGGTGGCGAGCGGTCTGCCGCATGACGTGCGCTGGCTGCTGGTTCCGCATCATGGCAGTCGCAGCGC
CTCCTCGAGCGCCTTCATCGAGGCGGCAGGCGCCCACGGCGCGCTTGTCTCGCGCAGCCTGCACAATGCCTTCGGTCACC
CGCACGCCGATGTCGTGCAGCGTCTCCGGGCATCGGGCGCTCAGATTTTCGACACGGCCGAGCTGGGCGCCTTGCAGATC
CGTCTCGGTCGTTTCGAGACCGTTCGGGGTTCGCGCGCCGAACGGCGTTTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (200-464)

• Metallo-beta-lactamase superfamily (Lactamase_B) (501-682)

• Domain of unknown function (DUF4131) (DUF4131) (6-167)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	71.509	95.682	0.684
comA	Ralstonia pseudosolanacearum GMI1000	37.117	100	0.393