Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   SSUD12_RS07700 Genome accession   NC_017621
Coordinates   1556646..1557329 (-) Length   227 a.a.
NCBI ID   WP_012027525.1    Uniprot ID   A0A0H3MWH7
Organism   Streptococcus suis D12     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1551646..1562329
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SSUD12_RS07675 (SSUD12_1547) - 1551950..1552267 (-) 318 WP_014638399.1 PadR family transcriptional regulator -
  SSUD12_RS11740 - 1552264..1552428 (-) 165 WP_041179224.1 hypothetical protein -
  SSUD12_RS07685 (SSUD12_1548) - 1552796..1554805 (-) 2010 WP_014638400.1 ABC transporter permease -
  SSUD12_RS07690 (SSUD12_1549) - 1554807..1555565 (-) 759 WP_014638401.1 ABC transporter ATP-binding protein -
  SSUD12_RS07695 (SSUD12_1550) - 1555661..1556653 (-) 993 WP_014638402.1 sensor histidine kinase -
  SSUD12_RS07700 (SSUD12_1551) braR 1556646..1557329 (-) 684 WP_012027525.1 response regulator transcription factor Regulator
  SSUD12_RS07705 (SSUD12_1552) - 1557499..1558680 (+) 1182 WP_014638403.1 DUF2974 domain-containing protein -
  SSUD12_RS07710 (SSUD12_1553) - 1558695..1559819 (-) 1125 WP_014638404.1 aminotransferase -
  SSUD12_RS07715 (SSUD12_1554) - 1559967..1560728 (-) 762 WP_014638405.1 nuclear transport factor 2 family protein -
  SSUD12_RS07720 (SSUD12_1555) - 1560738..1562249 (-) 1512 WP_014638406.1 ABC transporter permease/substrate-binding protein -

Sequence

Protein


Download         Length: 227 a.a.        Molecular weight: 26581.80 Da        Isoelectric Point: 4.5525

>NTDB_id=40892 SSUD12_RS07700 WP_012027525.1 1556646..1557329(-) (braR) [Streptococcus suis D12]
MQKILLIEDDKTISQLVAKNLINWGYQVQEVKDFQMVLEQMEEFQPHLILLDIGLPFFNGYYWCQEIRKTSRVPIMFLSS
HDQPMDIVMAINMGADDYVTKPFEMTVLLAKIQGLLRRTYDFVGEQSLLWFEEISLDLKTMQVSYGQVVEELTRNEFQIL
RVLFEHGKEVVSREELMRELWNSDIFVDDNTLSVNIARLRKKLAELDLPDVIATKKGVGYGLVWTHE

Nucleotide


Download         Length: 684 bp        

>NTDB_id=40892 SSUD12_RS07700 WP_012027525.1 1556646..1557329(-) (braR) [Streptococcus suis D12]
ATGCAGAAAATTCTTCTTATCGAGGATGATAAAACGATTAGCCAACTAGTTGCTAAAAACTTGATAAACTGGGGTTACCA
GGTGCAAGAGGTCAAGGATTTTCAGATGGTTTTGGAACAGATGGAAGAGTTTCAGCCCCATTTGATTTTACTGGATATTG
GCCTGCCTTTTTTCAATGGCTATTACTGGTGTCAGGAAATTCGCAAGACCTCCCGTGTGCCCATTATGTTTCTGTCTTCC
CATGACCAGCCAATGGATATTGTTATGGCGATCAATATGGGGGCGGATGACTATGTGACCAAGCCCTTTGAAATGACGGT
TCTCCTGGCCAAAATACAGGGGCTTCTCAGAAGAACCTATGACTTTGTCGGAGAACAAAGTTTACTCTGGTTTGAGGAGA
TTTCCCTAGACCTAAAGACCATGCAGGTGTCCTATGGACAGGTTGTGGAAGAGCTGACGCGAAATGAATTTCAGATTTTA
CGCGTTTTATTTGAACATGGCAAGGAAGTGGTCAGTCGCGAGGAGTTGATGAGAGAACTCTGGAATAGTGATATTTTTGT
GGATGACAATACTTTATCGGTTAACATCGCTCGCCTGCGTAAGAAATTGGCAGAACTGGATCTGCCAGATGTGATTGCGA
CCAAGAAAGGAGTAGGCTACGGCCTGGTGTGGACACATGAATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-113)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(151-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3MWH7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

47.706

96.035

0.458
  vicR Streptococcus mutans UA159

39.13

100

0.396
  micA Streptococcus pneumoniae Cp1015

37.991

100

0.383

Multiple sequence alignment