Detailed information NTG0408475

Bioinformatically predicted

Overview

• Name: luxQ
• Type: Regulator
• Locus tag: GPY13_RS16575
• Genome accession: NZ_CP046824
• Coordinates: 572000..574573 (+)
• Length: 857 a.a.
• NCBI ID: WP_001026296.1
• Uniprot ID: -
• Organism: Vibrio mimicus strain 06-2455
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 567000..579573

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GPY13_RS16540	-	567064..567315 (-)	252	WP_005520676.1	YgjV family protein	-
GPY13_RS16545	-	567727..568047 (-)	321	WP_001089530.1	DUF496 family protein	-
GPY13_RS16550	-	568236..568433 (+)	198	WP_001246068.1	hypothetical protein	-
GPY13_RS16555	-	568476..569125 (+)	650	Protein_496	YceH family protein	-
GPY13_RS16560	-	569125..569424 (+)	300	WP_000449703.1	GIY-YIG nuclease family protein	-
GPY13_RS16565	traF	569525..570684 (+)	1160	Protein_498	conjugal transfer protein TraF	-
GPY13_RS16570	luxP	570883..571980 (+)	1098	WP_000827826.1	autoinducer 2-binding periplasmic protein LuxP	Regulator
GPY13_RS16575	luxQ	572000..574573 (+)	2574	WP_001026296.1	quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ	Regulator
GPY13_RS16580	-	574565..575230 (-)	666	WP_000974292.1	flagellar brake protein	-
GPY13_RS16585	-	575389..575907 (-)	519	WP_000932976.1	hypothetical protein	-
GPY13_RS16590	-	576120..576518 (-)	399	WP_000831409.1	YgiW/YdeI family stress tolerance OB fold protein	-
GPY13_RS16595	-	576697..578160 (+)	1464	WP_000613320.1	cobyric acid synthase	-
GPY13_RS16600	modA	578172..578930 (+)	759	WP_000476362.1	molybdate ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 857 a.a.
• Molecular weight: 96850.70 Da
• Isoelectric Point: 5.7340

>NTDB_id=408475 GPY13_RS16575 WP_001026296.1 572000..574573(+) (luxQ) [Vibrio mimicus strain 06-2455]
MNIRPSQIKHKQRIASFITHAVVATLGVLILSVLFQSYQISSRLMAQEGQRTSVQTSSLIQSLFDFRLAALKIHQDSTAK
NVSLISALASRQSGRLDEFFSSVDELELANAPDLRFISSNDKILWDDGNASFYGISVPEQNKLIRKVAISGNWHLVQTPS
DGKSIHLLVRRSSLIESGTGQVMGYLYVGIVLNDNFALVETIRSGSNSENLVLAVDSNLLVSTLKGNEPYTLDYVMNSAN
DAMNDSFIVGQTFLDVEGVPTYLCVYSIQPNKNVLTLRDNFYFWMAFALVSMIAVSIASRWWLQKRIQSEIETLMSYTHK
LMELDTKSQFAGSKIYEFDYFGRTLEQSFRRLANKEKQFEDLFNFALSPTMLWNTAGRLIRMNPSAQIQFLREDAQNHFL
FEILERQLLPMITYAAQGKNPSEVTTEVDGRVYRWNLSPIMVEGQIISIITQGQDVTSIAEAEKQSQVARREAEESARVR
AEFLAKMSHELRTPLNGVLGVSQLLKRTPLTDEQREHVAVLCSSGEHLLAVLNDILDFSRLEQGKFRIQKSEFRLKELVC
AIDRIYRPLCNDKGIELVVESNITSATLVRSDQIRINQILFNLLNNAIKFTHQGSIRVALELIEGDPLAQLVIQVMDTGI
GIREEDLTVIFEPFMQAESTTTREYGGSGLGLTIVHSLVEMLSGQLHVSSEYGHGTRFEIQLPIELVEMTATPQQLAPPQ
EPYRLFEKPLRVLLVEDNHTNAFIAQAFCRKYGLDVSWVTDGLQAIEELKLHTYDLVLMDNQLPYLDGVETTKTIKQVLH
LPVVVYACTADGLEETRQAFFHAGAEYVLVKPLKEQTLHKALEHYKNQYLNNNDRSN

Nucleotide

• Length: 2574 bp

>NTDB_id=408475 GPY13_RS16575 WP_001026296.1 572000..574573(+) (luxQ) [Vibrio mimicus strain 06-2455]
TTGAACATTCGACCTAGCCAGATCAAGCATAAACAGCGTATCGCTTCATTTATTACTCATGCGGTGGTCGCGACCTTGGG
CGTGTTGATCCTGAGTGTTTTATTCCAAAGCTATCAGATCAGTAGCCGCTTGATGGCACAAGAGGGGCAACGAACCTCGG
TTCAAACCTCAAGCCTGATACAAAGCTTGTTCGATTTTCGTCTAGCGGCACTCAAAATTCACCAAGACAGTACGGCAAAA
AATGTCAGTTTAATCAGTGCATTGGCCAGTCGGCAGTCTGGTCGGTTGGATGAGTTCTTCTCCAGTGTTGATGAGCTTGA
ACTCGCTAATGCGCCCGATCTGCGTTTCATTTCGAGTAACGATAAAATCCTGTGGGATGATGGCAACGCCTCTTTCTATG
GGATCTCAGTACCTGAACAGAATAAGTTGATTCGCAAAGTGGCGATCAGTGGCAACTGGCATCTGGTGCAAACCCCTAGT
GATGGTAAATCGATCCACCTTTTAGTACGTCGCTCGTCACTGATTGAATCCGGCACTGGCCAAGTGATGGGCTACCTCTA
TGTTGGCATCGTACTTAACGACAACTTTGCTTTAGTCGAAACCATACGCAGTGGCAGTAACTCTGAAAACCTCGTGTTGG
CTGTGGATTCTAATCTGCTGGTTTCTACACTGAAAGGTAACGAGCCTTATACGTTGGATTACGTGATGAACAGTGCCAAC
GACGCAATGAACGACAGCTTTATTGTGGGGCAGACCTTTTTAGATGTGGAAGGTGTGCCAACCTACCTTTGTGTTTACTC
GATTCAGCCCAACAAAAATGTTCTGACCTTACGTGATAATTTTTATTTCTGGATGGCCTTTGCGCTCGTCAGCATGATTG
CAGTATCAATTGCATCACGCTGGTGGTTGCAAAAACGTATTCAGTCTGAAATCGAAACCTTAATGAGTTATACCCACAAG
CTGATGGAGTTAGATACGAAAAGTCAGTTCGCGGGGTCGAAAATCTATGAATTTGACTATTTTGGGCGAACTCTCGAGCA
GTCATTCCGCCGTTTGGCCAACAAAGAGAAGCAGTTTGAAGATCTCTTCAACTTTGCGCTGTCACCTACCATGTTATGGA
ATACGGCTGGTCGATTGATCCGTATGAACCCTTCGGCACAAATTCAGTTCTTGCGCGAAGATGCACAGAATCATTTCTTA
TTTGAGATTCTTGAACGTCAATTATTGCCGATGATCACCTATGCGGCACAAGGTAAAAACCCTAGTGAAGTGACGACAGA
AGTGGATGGGCGAGTCTATCGCTGGAACCTTTCGCCAATCATGGTGGAAGGGCAGATTATTTCGATAATCACCCAAGGTC
AGGATGTCACATCAATTGCAGAGGCAGAAAAGCAGAGCCAAGTCGCTAGGCGTGAAGCCGAAGAGTCTGCGCGCGTGAGG
GCGGAATTTTTGGCTAAGATGAGCCACGAGCTGCGTACGCCTCTCAACGGTGTGTTAGGTGTTTCTCAATTGCTTAAACG
TACTCCGCTCACTGATGAGCAGCGTGAGCATGTGGCGGTACTGTGTAGCAGTGGAGAACATCTGCTGGCGGTGCTGAATG
ATATTCTGGATTTCTCTCGTCTGGAACAAGGTAAATTCCGCATTCAAAAGAGTGAATTCCGTCTCAAGGAATTAGTCTGC
GCGATTGATCGAATCTATCGTCCATTGTGTAACGACAAAGGGATAGAGCTGGTGGTGGAATCAAACATCACGAGTGCGAC
CTTAGTACGCAGCGACCAGATCCGTATTAATCAGATTCTGTTTAACTTGCTCAATAATGCGATCAAATTTACTCACCAAG
GTTCCATTCGAGTCGCTCTGGAATTGATTGAAGGTGATCCTTTAGCGCAGTTGGTGATTCAAGTGATGGATACCGGGATT
GGGATTCGAGAAGAAGATCTGACCGTAATTTTTGAGCCATTTATGCAGGCGGAATCGACGACAACTCGTGAATACGGCGG
TAGTGGTTTGGGGTTGACCATAGTTCATAGTTTGGTCGAGATGCTCAGTGGGCAATTGCACGTGAGTTCAGAATATGGTC
ACGGTACGCGCTTTGAGATTCAGCTGCCGATAGAGTTGGTGGAAATGACCGCGACGCCTCAACAGCTTGCTCCACCGCAA
GAGCCGTATCGATTATTTGAAAAACCGCTACGTGTGCTGCTTGTTGAGGATAACCATACTAATGCGTTCATCGCTCAAGC
GTTTTGTCGTAAATATGGTCTTGATGTTAGCTGGGTCACCGATGGTTTACAGGCGATTGAGGAGCTCAAGCTCCACACTT
ATGACTTGGTGTTGATGGATAATCAGCTACCTTATCTTGATGGCGTAGAAACGACGAAAACCATCAAACAGGTTCTGCAT
TTGCCTGTTGTGGTGTATGCCTGTACGGCAGATGGTCTGGAAGAAACACGCCAAGCCTTCTTCCATGCAGGTGCAGAGTA
CGTACTCGTTAAACCACTCAAAGAGCAGACACTGCATAAAGCATTAGAGCACTATAAAAACCAGTATCTCAATAACAATG
ATCGCTCAAATTGA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (592-705)

• Response regulator receiver domain (Response_reg) (732-842)

• LuxQ, periplasmic (LuxQ-periplasm) (41-277)

• His Kinase A (phospho-acceptor) domain (HisKA) (480-544)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxQ	Vibrio cholerae strain A1552	89.566	99.533	0.891