Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   H0A38_RS01845 Genome accession   NZ_CP059048
Coordinates   374175..374957 (+) Length   260 a.a.
NCBI ID   WP_129881413.1    Uniprot ID   -
Organism   Lactococcus lactis strain LAC460     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 369175..379957
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H0A38_RS01820 (H0A38_01820) vicX 369200..370012 (-) 813 WP_003131583.1 MBL fold metallo-hydrolase Regulator
  H0A38_RS01825 (H0A38_01825) vicK 370181..371623 (-) 1443 WP_010905315.1 cell wall metabolism sensor histidine kinase WalK Regulator
  H0A38_RS01830 (H0A38_01830) yycF 371616..372317 (-) 702 WP_003131580.1 response regulator YycF -
  H0A38_RS01835 (H0A38_01835) tmk 372495..373130 (+) 636 WP_015425847.1 dTMP kinase -
  H0A38_RS01840 (H0A38_01840) - 373263..374123 (+) 861 WP_003131573.1 DNA polymerase III subunit delta' -
  H0A38_RS01845 (H0A38_01845) yaaT 374175..374957 (+) 783 WP_129881413.1 stage 0 sporulation family protein Regulator
  H0A38_RS01850 (H0A38_01850) yabA 374950..375276 (+) 327 WP_011675472.1 DNA replication initiation control protein YabA -
  H0A38_RS01855 (H0A38_01855) rsmI 375276..376151 (+) 876 WP_129881415.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  H0A38_RS01860 (H0A38_01860) - 376228..376419 (-) 192 WP_012897234.1 hypothetical protein -
  H0A38_RS01865 (H0A38_01865) mvk 376482..377414 (-) 933 WP_003131564.1 mevalonate kinase -
  H0A38_RS01870 (H0A38_01870) mvaD 377720..378676 (+) 957 WP_129881417.1 diphosphomevalonate decarboxylase -
  H0A38_RS01875 (H0A38_01875) - 378663..379652 (+) 990 WP_029344853.1 mevalonate kinase -

Sequence

Protein


Download         Length: 260 a.a.        Molecular weight: 29803.27 Da        Isoelectric Point: 6.0566

>NTDB_id=408323 H0A38_RS01845 WP_129881413.1 374175..374957(+) (yaaT) [Lactococcus lactis strain LAC460]
MIYEIKFAHGESNVFAISDIELAPQTEVILRSDKGNFYGKIVREISEEANLELHHTIVREVNEDDLQVIAKLEERSKQAK
DKVRQLVIEQGLEMKIIDVAYNFDQMQLFISFTAENRVDFRLLLRELATTFRIRIELRQIGPRDAAKIHGGLGPCGRPLC
CSEFVYEFPNVSIKMAKNQNLSLKQNKLNGLCGRLMCCLTYEDSFYKEAQQLFPDFGEFVTTSEGKGKVVGLNVLKNRVK
IRFGEYSKDFELAEIEVNHG

Nucleotide


Download         Length: 783 bp        

>NTDB_id=408323 H0A38_RS01845 WP_129881413.1 374175..374957(+) (yaaT) [Lactococcus lactis strain LAC460]
ATGATTTATGAAATAAAATTTGCACATGGCGAATCAAATGTATTTGCAATAAGTGATATAGAACTTGCTCCACAAACAGA
AGTTATCCTTCGTTCAGATAAGGGAAACTTTTACGGAAAAATTGTACGTGAAATTTCTGAAGAAGCGAATCTTGAACTTC
ACCACACGATTGTGCGTGAAGTAAATGAGGATGATCTCCAAGTTATTGCAAAACTTGAAGAACGTTCTAAACAAGCCAAA
GATAAAGTTCGCCAACTTGTCATCGAACAAGGTTTGGAAATGAAAATTATTGATGTTGCTTATAATTTCGACCAAATGCA
ACTTTTTATTTCGTTTACAGCAGAGAATCGTGTTGATTTTCGATTGCTTTTGCGTGAGTTGGCAACAACTTTTAGAATTA
GGATTGAACTTCGCCAAATTGGGCCAAGAGATGCGGCTAAAATTCATGGTGGACTTGGACCTTGTGGACGTCCTTTGTGC
TGTTCTGAGTTTGTTTATGAATTTCCAAATGTTTCAATCAAAATGGCCAAAAATCAAAATCTATCTTTGAAACAAAATAA
ATTGAACGGCCTTTGCGGTCGTTTGATGTGCTGTTTAACTTATGAAGATAGTTTTTATAAAGAAGCCCAACAACTTTTCC
CAGATTTTGGTGAGTTTGTAACTACCTCAGAAGGAAAAGGAAAAGTTGTTGGCTTAAATGTTTTAAAAAATAGAGTAAAA
ATCCGCTTTGGAGAATATAGCAAGGATTTTGAACTTGCAGAAATTGAGGTGAATCATGGCTGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(56-140)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

46.119

84.231

0.388

Multiple sequence alignment