Detailed information NTG0407857

Bioinformatically predicted

Overview

• Name: luxO
• Type: Regulator
• Locus tag: GPX86_RS03895
• Genome accession: NZ_CP046793
• Coordinates: 875695..877056 (-)
• Length: 453 a.a.
• NCBI ID: WP_158144961.1
• Uniprot ID: -
• Organism: Vibrio metschnikovii strain 9502-00
• Function: promote HapR production (predicted from homology) Competence regulation

Genomic Context

Location: 870695..882056

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GPX86_RS03875	folD	871878..872750 (+)	873	WP_158138136.1	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	-
GPX86_RS03880	-	872842..874044 (-)	1203	WP_154168655.1	NupC/NupG family nucleoside CNT transporter	-
GPX86_RS03885	-	874335..875288 (-)	954	WP_158144093.1	LysR family transcriptional regulator	-
GPX86_RS03890	luxU	875340..875687 (-)	348	WP_158144094.1	quorum-sensing phosphorelay protein LuxU	-
GPX86_RS03895	luxO	875695..877056 (-)	1362	WP_158144961.1	quorum-sensing sigma-54 dependent transcriptional regulator LuxO	Regulator
GPX86_RS03900	uvrB	877200..879230 (-)	2031	WP_158144095.1	excinuclease ABC subunit UvrB	-
GPX86_RS03910	-	879892..881130 (-)	1239	WP_199244805.1	dicarboxylate/amino acid:cation symporter	-

Sequence

Protein

• Length: 453 a.a.
• Molecular weight: 50620.72 Da
• Isoelectric Point: 5.5415

>NTDB_id=407857 GPX86_RS03895 WP_158144961.1 875695..877056(-) (luxO) [Vibrio metschnikovii strain 9502-00]
MVEDTASVAALYRSYLTPLEIDINIVSTGRDAIESLNRRTPDLILLDLRLPDMTGMDVLAAVKKQSPDVPIIFMTAHGSI
DTAVEAMRQGAQDFLIKPCEADRLRITVNNAMRKANKLKSENYDPNNQNYQGFIGSSQTMQAVYRTIDSAASSKASIFIT
GESGTGKEVCAEAIHAASKRGDKPFIAINCAAIPKDLIESELFGHVKGAFTGAASDRQGAAELANGGTLFLDELCEMDLD
LQTKLLRFIQTGTFQKVGSSKLHSVDVRFVCATNRDPWKEVQQGRFREDLYYRLYVIPLHLPPLRERGDDVIEIAYSLLG
HMAKEEGKGFVRLSSEVTERFKHYEWPGNVRQLQNVLRNVVVLNDGQEITLSMLPPPLNAPRMAEPTFLSQDEKVLSVHD
IFPLWLTEKQAIEKAIEVCDGNIPRAASYLDVSPSTIYRKLQTWNEKEQEKER

Nucleotide

• Length: 1362 bp

>NTDB_id=407857 GPX86_RS03895 WP_158144961.1 875695..877056(-) (luxO) [Vibrio metschnikovii strain 9502-00]
ATGGTTGAGGATACGGCTTCTGTAGCAGCATTGTACCGATCCTATCTGACTCCGCTAGAGATTGACATTAATATCGTCAG
CACCGGGCGCGATGCGATAGAGAGCCTTAACCGACGAACGCCCGATTTAATCCTGTTAGACTTGCGTTTGCCTGATATGA
CAGGAATGGATGTGCTTGCCGCGGTAAAAAAACAATCTCCCGATGTGCCGATCATCTTTATGACCGCACACGGCTCGATC
GATACTGCGGTCGAGGCGATGCGTCAAGGTGCACAAGACTTTCTGATCAAGCCGTGTGAGGCGGATCGGCTACGTATTAC
CGTCAATAATGCGATGCGCAAAGCGAATAAGCTTAAAAGCGAAAATTACGATCCAAATAATCAAAACTATCAAGGTTTTA
TTGGCAGTAGCCAAACGATGCAGGCGGTATATCGCACGATTGATTCCGCAGCGAGCAGTAAAGCCAGCATTTTTATTACC
GGTGAGAGTGGTACTGGTAAAGAAGTGTGCGCCGAAGCGATTCATGCCGCCAGTAAACGAGGCGACAAACCGTTTATCGC
CATCAACTGTGCTGCGATTCCAAAAGACTTGATTGAAAGTGAACTGTTTGGTCACGTCAAAGGTGCCTTTACCGGAGCCG
CCTCAGATAGACAAGGTGCTGCGGAGTTAGCTAATGGTGGAACGCTCTTTTTGGATGAGCTGTGCGAGATGGATCTTGAC
CTGCAAACCAAATTATTGCGTTTTATCCAGACTGGTACTTTTCAAAAAGTCGGCTCTTCTAAGCTACACAGTGTCGATGT
GCGCTTTGTTTGTGCGACGAACCGTGATCCCTGGAAAGAAGTTCAACAAGGCCGTTTTCGCGAAGACTTATATTACCGTT
TATACGTGATTCCATTACATTTACCGCCACTACGAGAACGGGGCGATGATGTGATTGAAATTGCTTATTCATTATTAGGT
CATATGGCGAAAGAGGAAGGCAAAGGATTTGTTCGTCTCTCTTCAGAAGTGACAGAGCGTTTTAAGCATTATGAATGGCC
AGGTAATGTGCGCCAGTTACAAAACGTACTGCGTAATGTCGTGGTATTGAATGATGGACAAGAAATTACCTTATCGATGC
TGCCTCCGCCACTCAATGCGCCAAGAATGGCAGAGCCTACCTTTTTGTCTCAGGATGAGAAGGTGCTTTCTGTGCATGAT
ATTTTTCCGTTATGGCTAACGGAAAAGCAAGCGATAGAAAAAGCCATTGAAGTGTGTGATGGCAATATTCCAAGAGCGGC
GAGTTATTTAGATGTCAGTCCCTCAACGATTTATCGCAAACTGCAAACCTGGAATGAAAAAGAGCAGGAAAAGGAGCGTT
AG

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (2-108)

• Sigma-54 interaction domain (Sigma54_activat) (134-299)

• Bacterial regulatory protein, Fis family (HTH_8) (404-442)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxO	Vibrio cholerae strain A1552	87.082	99.117	0.863
pilR	Pseudomonas aeruginosa PAK	38.876	98.234	0.382