Detailed information NTG0040780

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: SSUD9_RS04980
• Genome accession: NC_017620
• Coordinates: 1017840..1018910 (+)
• Length: 356 a.a.
• NCBI ID: WP_014636926.1
• Uniprot ID: -
• Organism: Streptococcus suis D9
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1012840..1023910

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SSUD9_RS04955 (SSUD9_1010)	-	1013561..1013893 (+)	333	WP_002935001.1	putative DNA-binding protein	-
SSUD9_RS04960 (SSUD9_1011)	ffh	1013906..1015480 (+)	1575	WP_002935002.1	signal recognition particle protein	-
SSUD9_RS04965 (SSUD9_1012)	-	1015674..1016342 (+)	669	WP_002935003.1	SatD family protein	-
SSUD9_RS04970 (SSUD9_1013)	-	1016346..1017086 (+)	741	WP_002935004.1	DUF3307 domain-containing protein	-
SSUD9_RS04975 (SSUD9_1014)	-	1017152..1017673 (+)	522	WP_002935005.1	AAA family ATPase	-
SSUD9_RS04980 (SSUD9_1015)	xerS	1017840..1018910 (+)	1071	WP_014636926.1	tyrosine recombinase XerS	Machinery gene
SSUD9_RS04985 (SSUD9_1016)	-	1018980..1020490 (-)	1511	Protein_934	phosphomannomutase/phosphoglucomutase	-
SSUD9_RS04990 (SSUD9_1017)	-	1020566..1021507 (-)	942	WP_002935009.1	sensor histidine kinase	-
SSUD9_RS04995 (SSUD9_1018)	braR	1021504..1022169 (-)	666	WP_009909826.1	DNA-binding response regulator	Regulator
SSUD9_RS05000 (SSUD9_1019)	-	1022208..1022414 (-)	207	WP_370287028.1	type II toxin-antitoxin system RelE family toxin	-
SSUD9_RS05005 (SSUD9_1020)	relB	1022455..1022694 (-)	240	WP_002935014.1	type II toxin-antitoxin system RelB family antitoxin	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41531.64 Da
• Isoelectric Point: 9.0445

>NTDB_id=40780 SSUD9_RS04980 WP_014636926.1 1017840..1018910(+) (xerS) [Streptococcus suis D9]
MRRELLLEKIDQLKEIMPWFVLEYYQSKLAVPYSFTTLYEYLKEYRRFFEWLQDSDLVSVERIADIPLDILEHLTKKDME
AFILYLRERPLLNANTTQNGVSQTTINRTLSALSSLFKYLTEEVENEQGEPYFYRNVMKKVSTKKKKETLAARAENIKQK
LFLGDETMEFLDYVDKEYQVNLSNRALSSFQKNKERDLAILALLLASGVRLSEAVNLDLRDVNLNMMIIEVTRKGGKRDS
VNVAGFAKPYLEAYMSIRQQRYKAEKTDTAFFLSEYRGLPNRIDASSIEKMVAKYSADFKIRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHANTQVTDLYTHIVNDEQKNALDQL

Nucleotide

• Length: 1071 bp

>NTDB_id=40780 SSUD9_RS04980 WP_014636926.1 1017840..1018910(+) (xerS) [Streptococcus suis D9]
ATGAGACGCGAGTTATTACTAGAAAAAATTGATCAACTAAAAGAAATTATGCCTTGGTTTGTTCTGGAATATTATCAGTC
AAAATTGGCTGTGCCTTACAGTTTTACTACCTTATATGAATACTTGAAAGAATACCGTCGATTCTTTGAGTGGTTACAGG
ATTCGGATTTGGTATCTGTGGAACGGATTGCTGACATTCCTTTGGATATTCTGGAACATTTGACAAAAAAAGATATGGAA
GCCTTTATTCTTTATCTGCGGGAGCGTCCCTTGCTGAACGCCAATACCACGCAGAATGGTGTGTCGCAGACCACCATTAA
CCGTACCCTGTCGGCTCTTTCTAGTCTCTTCAAGTATTTAACCGAAGAAGTGGAAAATGAGCAGGGCGAGCCCTACTTCT
ACCGCAATGTCATGAAAAAGGTATCTACCAAGAAGAAGAAGGAAACCTTGGCAGCGCGGGCTGAGAACATCAAGCAAAAG
CTCTTTTTGGGCGATGAAACCATGGAGTTCTTGGACTATGTGGACAAGGAATACCAAGTCAATCTCTCTAACCGTGCCCT
CTCCTCTTTCCAGAAAAATAAGGAGCGAGATTTGGCGATTCTGGCACTTCTCTTGGCTTCTGGCGTCCGTCTGTCAGAAG
CGGTGAATTTGGATCTTCGAGATGTAAATCTCAATATGATGATTATCGAAGTAACCCGTAAGGGTGGTAAGCGGGACTCG
GTCAATGTGGCTGGGTTTGCTAAGCCCTATCTGGAAGCCTATATGAGCATCCGTCAGCAACGCTACAAGGCTGAAAAAAC
GGATACGGCCTTCTTCCTGTCCGAATACCGTGGTCTACCCAATCGTATCGATGCTTCTTCTATTGAAAAAATGGTTGCCA
AGTACTCTGCGGACTTCAAGATACGCGTAACCCCCCACAAACTCCGTCATACCTTGGCAACTCGCCTATACGACGCCACA
AAGTCGCAAGTTCTGGTCAGTCATCAGCTGGGCCACGCCAATACTCAGGTCACTGACCTCTACACCCATATAGTCAATGA
TGAGCAAAAAAATGCACTGGATCAATTATAG

Domains

Predicted by InterProScan.

• Phage integrase family (Phage_integrase) (190-344)

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4) (33-122)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	83.146	100	0.831