Detailed information NTG0406466

Bioinformatically predicted

Overview

• Name: pilY2
• Type: Machinery gene
• Locus tag: GO593_RS04620
• Genome accession: NZ_CP046654
• Coordinates: 971179..971661 (-)
• Length: 160 a.a.
• NCBI ID: WP_001046417.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain ATCC 19606
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 966179..976661

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GO593_RS04585 (GO593_04585)	-	966288..967319 (+)	1032	WP_001189454.1	lipase secretion chaperone	-
GO593_RS04590 (GO593_04590)	-	967434..968375 (+)	942	WP_085916958.1	lipase family alpha/beta hydrolase	-
GO593_RS04595 (GO593_04595)	rplS	968428..968796 (-)	369	WP_000014562.1	50S ribosomal protein L19	-
GO593_RS04600 (GO593_04600)	trmD	969005..969745 (-)	741	WP_000464598.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
GO593_RS04605 (GO593_04605)	rimM	969791..970339 (-)	549	WP_000189236.1	ribosome maturation factor RimM	-
GO593_RS04610 (GO593_04610)	rpsP	970359..970610 (-)	252	WP_000260334.1	30S ribosomal protein S16	-
GO593_RS04615 (GO593_04615)	pilE	970757..971182 (-)	426	WP_000788344.1	type IV pilin protein	Machinery gene
GO593_RS04620 (GO593_04620)	pilY2	971179..971661 (-)	483	WP_001046417.1	type IV pilin protein	Machinery gene
GO593_RS04625 (GO593_04625)	pilY1	971674..975528 (-)	3855	WP_000768965.1	PilC/PilY family type IV pilus protein	Machinery gene
GO593_RS04630 (GO593_04630)	pilX	975540..976358 (-)	819	WP_000149377.1	PilX N-terminal domain-containing pilus assembly protein	Machinery gene

Sequence

Protein

• Length: 160 a.a.
• Molecular weight: 17516.77 Da
• Isoelectric Point: 8.4817

>NTDB_id=406466 GO593_RS04620 WP_001046417.1 971179..971661(-) (pilY2) [Acinetobacter baumannii strain ATCC 19606]
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGTVTCNVCETNSENWQ

Nucleotide

• Length: 483 bp

>NTDB_id=406466 GO593_RS04620 WP_001046417.1 971179..971661(-) (pilY2) [Acinetobacter baumannii strain ATCC 19606]
ATGAATAAGTACTCTATTCTACGGTTCAATCAAGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTGGAACAGCATAAATCAAGAAATTTTACTTATAGGGGGTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAGATTACTGATGATACGACGACAGGAAATTTATTGACGAATGCTGCTGCAAATGGACAAAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAACTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGTCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAACAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA

Domains

Predicted by InterproScan.

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (34-115)

• Prokaryotic N-terminal methylation motif (N_methyl) (10-32)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilY2	Acinetobacter baumannii D1279779	98.125	100	0.981
comE	Acinetobacter baylyi ADP1	41.279	100	0.444