Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | GPA00_RS01655 | Genome accession | NZ_CP046629 |
| Coordinates | 327747..328253 (-) | Length | 168 a.a. |
| NCBI ID | WP_024343575.1 | Uniprot ID | A0A239R6S2 |
| Organism | Streptococcus equinus strain CNU G6 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 322747..333253
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GPA00_RS01640 (GPA00_01640) | - | 325408..326352 (+) | 945 | WP_024343577.1 | magnesium transporter CorA family protein | - |
| GPA00_RS01645 (GPA00_01645) | - | 326684..327340 (+) | 657 | WP_021143092.1 | DUF1129 domain-containing protein | - |
| GPA00_RS01650 (GPA00_01650) | rpsR | 327448..327687 (-) | 240 | WP_000068664.1 | 30S ribosomal protein S18 | - |
| GPA00_RS01655 (GPA00_01655) | ssbA | 327747..328253 (-) | 507 | WP_024343575.1 | single-stranded DNA-binding protein | Machinery gene |
| GPA00_RS01660 (GPA00_01660) | rpsF | 328265..328555 (-) | 291 | WP_004233201.1 | 30S ribosomal protein S6 | - |
| GPA00_RS01665 (GPA00_01665) | - | 328764..328928 (-) | 165 | WP_021143095.1 | hypothetical protein | - |
| GPA00_RS01670 (GPA00_01670) | - | 329102..330040 (-) | 939 | WP_024343574.1 | class C sortase | - |
| GPA00_RS01675 (GPA00_01675) | - | 330137..331543 (-) | 1407 | WP_157327280.1 | SpaH/EbpB family LPXTG-anchored major pilin | - |
Sequence
Protein
Download Length: 168 a.a. Molecular weight: 18570.24 Da Isoelectric Point: 4.9008
>NTDB_id=406274 GPA00_RS01655 WP_024343575.1 327747..328253(-) (ssbA) [Streptococcus equinus strain CNU G6]
MINNVVLVGRMTRDAELRYTPSNQAVATFTLAVNRNFKNQNGEREADFINCVIWRQQAENLANWAKKGTLIGVTGRIQTR
NYENQQGQRVYVTEIVADSFQILESRATREGQSGGSYNGGFNNNSSFGGSSNGGFSSQPSQQTPNFGRDESPFGNSNPMD
ISDDDLPF
MINNVVLVGRMTRDAELRYTPSNQAVATFTLAVNRNFKNQNGEREADFINCVIWRQQAENLANWAKKGTLIGVTGRIQTR
NYENQQGQRVYVTEIVADSFQILESRATREGQSGGSYNGGFNNNSSFGGSSNGGFSSQPSQQTPNFGRDESPFGNSNPMD
ISDDDLPF
Nucleotide
Download Length: 507 bp
>NTDB_id=406274 GPA00_RS01655 WP_024343575.1 327747..328253(-) (ssbA) [Streptococcus equinus strain CNU G6]
ATGATTAATAATGTAGTACTTGTTGGTCGTATGACCCGCGATGCAGAACTCCGTTACACACCATCTAATCAAGCAGTTGC
GACATTTACACTTGCTGTAAACCGTAACTTCAAGAACCAAAATGGTGAACGTGAAGCTGATTTTATTAACTGTGTGATTT
GGCGTCAGCAAGCTGAAAACTTAGCTAACTGGGCTAAAAAAGGTACATTGATTGGTGTTACTGGTCGTATTCAGACTCGT
AACTATGAAAATCAACAAGGTCAGCGCGTTTACGTAACTGAGATTGTTGCAGATAGCTTCCAAATCTTGGAAAGCCGTGC
TACACGTGAAGGACAATCTGGTGGTTCTTACAATGGTGGATTCAATAACAATTCATCATTTGGTGGATCTTCAAACGGTG
GTTTCTCATCACAACCTTCACAACAAACACCTAATTTCGGTCGTGACGAAAGCCCATTTGGTAATTCAAACCCAATGGAC
ATTTCAGATGACGATCTTCCATTCTAA
ATGATTAATAATGTAGTACTTGTTGGTCGTATGACCCGCGATGCAGAACTCCGTTACACACCATCTAATCAAGCAGTTGC
GACATTTACACTTGCTGTAAACCGTAACTTCAAGAACCAAAATGGTGAACGTGAAGCTGATTTTATTAACTGTGTGATTT
GGCGTCAGCAAGCTGAAAACTTAGCTAACTGGGCTAAAAAAGGTACATTGATTGGTGTTACTGGTCGTATTCAGACTCGT
AACTATGAAAATCAACAAGGTCAGCGCGTTTACGTAACTGAGATTGTTGCAGATAGCTTCCAAATCTTGGAAAGCCGTGC
TACACGTGAAGGACAATCTGGTGGTTCTTACAATGGTGGATTCAATAACAATTCATCATTTGGTGGATCTTCAAACGGTG
GTTTCTCATCACAACCTTCACAACAAACACCTAATTTCGGTCGTGACGAAAGCCCATTTGGTAATTCAAACCCAATGGAC
ATTTCAGATGACGATCTTCCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
58.659 |
100 |
0.625 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
60 |
100 |
0.607 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
55.963 |
64.881 |
0.363 |