Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   GPA00_RS00630 Genome accession   NZ_CP046629
Coordinates   130798..131802 (-) Length   334 a.a.
NCBI ID   WP_021142864.1    Uniprot ID   -
Organism   Streptococcus equinus strain CNU G6     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 125798..136802
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GPA00_RS00615 (GPA00_00615) thrS 126084..128030 (-) 1947 WP_157327111.1 threonine--tRNA ligase -
  GPA00_RS00620 (GPA00_00620) - 128381..129715 (-) 1335 WP_024343724.1 glycosyltransferase family 4 protein -
  GPA00_RS00625 (GPA00_00625) - 129717..130715 (-) 999 WP_021142863.1 glycosyltransferase family 4 protein -
  GPA00_RS00630 (GPA00_00630) ccpA 130798..131802 (-) 1005 WP_021142864.1 catabolite control protein A Regulator
  GPA00_RS00635 (GPA00_00635) - 132143..133228 (+) 1086 WP_157327113.1 M24 family metallopeptidase -
  GPA00_RS00640 (GPA00_00640) - 133263..133589 (-) 327 WP_157327114.1 DMT family transporter -
  GPA00_RS00645 (GPA00_00645) - 133717..134211 (+) 495 WP_021142868.1 NAD(+) diphosphatase -
  GPA00_RS00650 (GPA00_00650) - 134228..135118 (-) 891 WP_157327116.1 LysR family transcriptional regulator -
  GPA00_RS00655 (GPA00_00655) - 135295..136023 (+) 729 WP_004232843.1 DUF554 domain-containing protein -
  GPA00_RS00660 (GPA00_00660) - 136205..136639 (+) 435 WP_074566765.1 MarR family winged helix-turn-helix transcriptional regulator -

Sequence


Protein


Download         Length: 334 a.a.        Molecular weight: 36727.77 Da        Isoelectric Point: 5.3038

>NTDB_id=406269 GPA00_RS00630 WP_021142864.1 130798..131802(-) (ccpA) [Streptococcus equinus strain CNU G6]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFS
ILARGIDDIAAMYKYNIVLASSDEDDDKEVNVVNTLFAKQVDGIIFMGHHLTEKIRAEFSRSRTPVVLAGTVDLEHQLPS
VNIDYKAAVADVVDILAKNNKDIAFVSGPLIDEINGKVRLAGYKEGLEKNNLSFKEGLVFEANYNYKDGYELAQRVMNSG
ATAAYVAEDELAAGLLNGLFAAGKKVPEDFEIITSNDSPITSYTRPNLSSISQPVYDLGAVSMRMLTKIMNKEELEEKEI
ILNHGLKLRGTSRQ

Nucleotide


Download         Length: 1005 bp        

>NTDB_id=406269 GPA00_RS00630 WP_021142864.1 130798..131802(-) (ccpA) [Streptococcus equinus strain CNU G6]
ATGAACACTGATGATACGATTACAATTTATGACGTTGCACGTGAAGCTGGCGTCTCAATGGCAACAGTCAGTCGTGTTGT
AAATGGTAATAAAAATGTAAAGGAAAACACTCGTAAAAAAGTCCTTGAAGTTATTGACCGTTTAGACTATCGTCCAAATG
CAGTTGCTCGTGGTTTGGCAAGTAAGAAAACGACAACTGTTGGTGTTGTTATTCCAAATATCGCTAATAGCTATTTCTCA
ATTTTAGCGAGAGGGATTGATGACATTGCTGCTATGTATAAATACAATATCGTTCTTGCGTCAAGTGATGAAGATGACGA
TAAAGAAGTTAATGTCGTAAACACTTTGTTTGCTAAACAAGTAGATGGTATTATCTTCATGGGTCACCATTTGACTGAAA
AAATTCGTGCAGAGTTCTCTCGCTCACGCACACCAGTTGTTCTAGCAGGGACAGTTGATTTAGAACATCAACTTCCAAGT
GTTAATATTGATTACAAAGCTGCTGTAGCAGATGTTGTTGATATTTTAGCTAAAAACAATAAAGATATTGCCTTTGTTTC
AGGACCACTTATTGACGAAATCAATGGTAAAGTTCGTCTTGCTGGTTACAAAGAAGGACTTGAAAAGAACAATCTTTCAT
TCAAAGAAGGACTTGTATTTGAAGCAAACTATAACTACAAAGATGGTTATGAGCTTGCTCAACGTGTGATGAACTCAGGT
GCAACAGCTGCTTATGTAGCTGAAGATGAATTAGCTGCAGGTCTTTTGAACGGCTTGTTTGCTGCAGGTAAAAAAGTTCC
TGAAGACTTTGAAATCATTACAAGTAATGACTCACCAATTACTTCATACACACGTCCAAACCTCAGCTCAATCAGTCAAC
CAGTTTATGACCTTGGAGCTGTCAGCATGCGTATGTTGACTAAAATCATGAACAAAGAAGAACTTGAAGAAAAAGAAATC
ATTCTTAATCATGGTCTTAAATTACGTGGTACATCACGTCAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

79.042

100

0.79

  ccpA Streptococcus pneumoniae D39

76.347

100

0.763

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

56.495

99.102

0.56


Multiple sequence alignment