Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   GO596_RS05405 Genome accession   NZ_CP046628
Coordinates   1075412..1076416 (+) Length   334 a.a.
NCBI ID   WP_021142864.1    Uniprot ID   -
Organism   Streptococcus equinus strain CNU 77-23     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1070412..1081416
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GO596_RS05375 (GO596_05375) - 1070576..1071010 (-) 435 WP_157339336.1 MarR family winged helix-turn-helix transcriptional regulator -
  GO596_RS05380 (GO596_05380) - 1071192..1071920 (-) 729 WP_157339337.1 DUF554 domain-containing protein -
  GO596_RS05385 (GO596_05385) - 1072097..1072987 (+) 891 WP_157339338.1 LysR family transcriptional regulator -
  GO596_RS05390 (GO596_05390) - 1073004..1073498 (-) 495 WP_021142868.1 NAD(+) diphosphatase -
  GO596_RS05395 (GO596_05395) - 1073625..1073951 (+) 327 WP_157339339.1 DMT family transporter -
  GO596_RS05400 (GO596_05400) - 1073986..1075071 (-) 1086 WP_027968483.1 M24 family metallopeptidase -
  GO596_RS05405 (GO596_05405) ccpA 1075412..1076416 (+) 1005 WP_021142864.1 catabolite control protein A Regulator
  GO596_RS05410 (GO596_05410) - 1076499..1077497 (+) 999 WP_157339340.1 glycosyltransferase family 4 protein -
  GO596_RS05415 (GO596_05415) - 1077499..1078833 (+) 1335 WP_157339341.1 glycosyltransferase family 4 protein -
  GO596_RS05420 (GO596_05420) thrS 1079184..1081130 (+) 1947 WP_024343725.1 threonine--tRNA ligase -

Sequence


Protein


Download         Length: 334 a.a.        Molecular weight: 36727.77 Da        Isoelectric Point: 5.3038

>NTDB_id=406247 GO596_RS05405 WP_021142864.1 1075412..1076416(+) (ccpA) [Streptococcus equinus strain CNU 77-23]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFS
ILARGIDDIAAMYKYNIVLASSDEDDDKEVNVVNTLFAKQVDGIIFMGHHLTEKIRAEFSRSRTPVVLAGTVDLEHQLPS
VNIDYKAAVADVVDILAKNNKDIAFVSGPLIDEINGKVRLAGYKEGLEKNNLSFKEGLVFEANYNYKDGYELAQRVMNSG
ATAAYVAEDELAAGLLNGLFAAGKKVPEDFEIITSNDSPITSYTRPNLSSISQPVYDLGAVSMRMLTKIMNKEELEEKEI
ILNHGLKLRGTSRQ

Nucleotide


Download         Length: 1005 bp        

>NTDB_id=406247 GO596_RS05405 WP_021142864.1 1075412..1076416(+) (ccpA) [Streptococcus equinus strain CNU 77-23]
ATGAACACTGATGATACGATTACAATTTATGACGTTGCACGTGAAGCTGGCGTCTCAATGGCAACAGTCAGTCGTGTTGT
AAATGGTAATAAAAATGTAAAGGAAAACACTCGTAAAAAAGTCCTTGAAGTTATTGACCGTTTAGACTATCGTCCAAATG
CAGTTGCTCGTGGTTTGGCAAGTAAGAAAACGACAACTGTTGGTGTTGTTATTCCAAATATCGCTAATAGCTATTTCTCA
ATTTTAGCGAGAGGGATTGATGACATTGCTGCTATGTATAAATACAATATCGTTCTTGCATCAAGTGATGAAGATGACGA
TAAAGAAGTTAATGTCGTAAACACTTTGTTTGCTAAACAAGTTGATGGTATTATCTTCATGGGTCACCATTTGACTGAAA
AAATTCGTGCAGAGTTCTCTCGCTCACGCACACCAGTTGTTCTAGCAGGGACAGTTGATTTAGAACATCAACTTCCAAGT
GTTAATATTGATTACAAAGCTGCTGTAGCAGATGTTGTTGATATTTTAGCTAAAAACAATAAAGATATTGCCTTTGTTTC
AGGACCACTTATTGACGAAATCAATGGTAAAGTTCGTCTTGCTGGTTACAAAGAAGGACTTGAAAAGAACAATCTTTCAT
TCAAAGAAGGACTTGTATTTGAAGCAAACTATAACTACAAAGATGGTTATGAGCTTGCTCAACGTGTGATGAACTCAGGT
GCAACAGCTGCTTATGTAGCTGAAGATGAATTAGCTGCAGGTCTTTTGAACGGCTTGTTTGCTGCAGGTAAAAAAGTTCC
TGAAGACTTTGAAATCATTACAAGTAATGACTCACCAATTACTTCATACACACGTCCAAACCTCAGCTCAATCAGTCAAC
CGGTTTATGACCTTGGAGCTGTCAGCATGCGTATGTTGACTAAAATCATGAACAAAGAAGAACTTGAAGAAAAAGAAATC
ATTCTTAATCATGGTCTTAAATTACGTGGTACATCACGTCAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

79.042

100

0.79

  ccpA Streptococcus pneumoniae D39

76.347

100

0.763

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

56.495

99.102

0.56


Multiple sequence alignment