Detailed information NTG0405961

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: GO602_RS15740
• Genome accession: NZ_CP046602
• Coordinates: 3399212..3401437 (-)
• Length: 741 a.a.
• NCBI ID: WP_124181138.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa strain CMC-115
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3394212..3406437

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GO602_RS15705 (GO602_15695)	murB	3394602..3395621 (-)	1020	WP_024918020.1	UDP-N-acetylmuramate dehydrogenase	-
GO602_RS15710 (GO602_15700)	-	3395618..3396082 (-)	465	WP_121127976.1	low molecular weight protein-tyrosine-phosphatase	-
GO602_RS15715 (GO602_15705)	kdsB	3396082..3396846 (-)	765	WP_058139291.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
GO602_RS15720 (GO602_15710)	-	3396846..3397031 (-)	186	WP_003091157.1	Trm112 family protein	-
GO602_RS15725 (GO602_15715)	lpxK	3397069..3398067 (-)	999	WP_058017665.1	tetraacyldisaccharide 4'-kinase	-
GO602_RS15730 (GO602_15720)	-	3398067..3398507 (-)	441	WP_003091161.1	ExbD/TolR family protein	-
GO602_RS15735 (GO602_15725)	exbB	3398504..3399139 (-)	636	WP_003091163.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
GO602_RS15740 (GO602_15730)	comA	3399212..3401437 (-)	2226	WP_124181138.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
GO602_RS15745 (GO602_15735)	-	3401568..3402101 (+)	534	WP_024917554.1	DUF2062 domain-containing protein	-
GO602_RS15750 (GO602_15740)	-	3402207..3403451 (-)	1245	WP_058139294.1	lipoprotein-releasing ABC transporter permease subunit	-
GO602_RS15755 (GO602_15745)	lolD	3403521..3404204 (-)	684	WP_003091168.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
GO602_RS15760 (GO602_15750)	-	3404197..3405447 (-)	1251	WP_024917556.1	lipoprotein-releasing ABC transporter permease subunit	-
GO602_RS15765 (GO602_15755)	-	3405550..3406149 (+)	600	WP_124129745.1	PilZ domain-containing protein	-

Sequence

Protein

• Length: 741 a.a.
• Molecular weight: 79800.38 Da
• Isoelectric Point: 10.5172

>NTDB_id=405961 GO602_RS15740 WP_124181138.1 3399212..3401437(-) (comA) [Pseudomonas aeruginosa strain CMC-115]
MRLGLPALAAGLLALRFLAELPSVGWLLGMAAVGLLLLPGRLYWLGLFLLGFVWACGSAQLALDGRLAAELDGRTLWLEG
RVADLPASGEGVTRFRLEEVSGARDVLLPARLRLSWRGAPPLMGGERWRLAVTLKRPRGLVNAAGFDYEAWLLAQRVGAV
GTVKAGQRLQQGSGLDAWRDAWRQRLLAVDAQGRGAALAALVLGDGSGLSAAEWRMFQDTGTVHLMVISGSHISLLAGML
YGLVAALHRLGCWPRRLPWLPCACALGLLGAWSYGLMAGFEVPVRRACLMVSLALVWRLRFRHLGLLTPLLGTLVLVLLA
EPLASLQAGFWLSFLAVALLLWLFAGRLGRWRWWAAWGRAQWGMALGLAMPLLALGLPLSLSGALANLLAVPWIELLVVP
PALAGSLLLWVPGLGEGLLRAAGVSLDLLFRALALLAGLAEAWQPPAAAAWSVALGMLGALCWLAPAGLPLRALGAALLL
PALLPSSPPVEWGRAEVRVLDVGQGLAVLVRTRGHALLYDSGARQGAFDMGERVVVPVLRSLDLRRLDGLLLSHADNDHA
GGAPTVASRFPPGWLVSGEPARLPSPLLADSCDERSWSWDGVVFEQWAWAQASDSNERSCVLRVEADGEVLLLTGDISRA
AEHAWLARQADPRVDWLLAPHHGSRSSSGVAFVLRARPRHVLVSRGWRNAFGHPHGEVMERYARVAAQVHDTARDGALTF
LLGSRGGARRERDSAHFWREK

Nucleotide

• Length: 2226 bp

>NTDB_id=405961 GO602_RS15740 WP_124181138.1 3399212..3401437(-) (comA) [Pseudomonas aeruginosa strain CMC-115]
ATGCGCCTGGGATTGCCAGCCCTCGCCGCGGGGCTGCTGGCTCTGCGCTTCCTGGCGGAATTGCCGTCGGTCGGCTGGTT
GCTGGGCATGGCCGCCGTCGGGCTGTTGCTGCTGCCCGGCCGGCTGTACTGGCTGGGGTTGTTCCTGCTCGGGTTCGTCT
GGGCCTGCGGCTCGGCACAACTCGCCCTGGACGGACGCCTGGCCGCCGAGCTGGACGGTCGCACCCTCTGGCTGGAAGGG
CGCGTGGCCGATCTGCCGGCGAGCGGCGAGGGGGTCACGCGCTTCCGGCTGGAGGAGGTCAGCGGTGCGCGGGACGTGCT
CCTTCCTGCGCGCCTGCGCCTGAGCTGGCGCGGCGCACCGCCGCTGATGGGCGGCGAACGCTGGCGCCTGGCGGTGACCC
TGAAACGACCTCGCGGCCTGGTGAATGCGGCGGGTTTCGACTACGAGGCCTGGCTGCTGGCGCAGCGTGTCGGTGCCGTT
GGCACGGTGAAGGCGGGCCAACGCCTACAGCAGGGCAGCGGCCTGGATGCCTGGCGCGACGCCTGGCGCCAGCGCCTGCT
GGCGGTCGACGCGCAGGGGCGCGGCGCCGCCCTGGCGGCGCTGGTGCTGGGGGATGGCTCGGGGTTGAGCGCGGCCGAGT
GGCGCATGTTCCAGGACACCGGCACCGTGCATCTGATGGTCATCTCCGGTTCGCATATCTCGTTGCTGGCGGGGATGCTC
TATGGCCTGGTGGCGGCCTTGCACCGCCTGGGCTGCTGGCCGCGGCGCCTGCCCTGGCTGCCCTGTGCCTGCGCCCTGGG
TTTGCTTGGCGCCTGGAGCTACGGGCTGATGGCAGGCTTTGAAGTCCCGGTGCGGCGCGCCTGTCTGATGGTCAGCCTGG
CGCTGGTCTGGCGCCTGCGTTTCCGTCACCTGGGCCTGCTCACGCCGCTGCTGGGAACGCTGGTGCTGGTCTTGCTGGCC
GAGCCGCTGGCCAGCTTGCAAGCGGGGTTCTGGCTGTCGTTCCTGGCGGTTGCGCTGCTGCTCTGGCTGTTCGCCGGGCG
CCTTGGGCGCTGGCGCTGGTGGGCGGCCTGGGGGCGGGCGCAGTGGGGGATGGCGCTGGGGCTGGCGATGCCGCTGCTGG
CGCTGGGGCTGCCGTTGAGCCTGAGCGGAGCGCTGGCCAATCTGCTGGCGGTGCCGTGGATCGAGCTGCTGGTAGTGCCC
CCGGCCCTGGCGGGGAGCCTGCTGCTGTGGGTGCCCGGGTTGGGCGAGGGGTTGCTTCGCGCCGCTGGCGTTTCGCTGGA
CCTGCTGTTTCGTGCGCTTGCCCTGCTGGCGGGCCTGGCCGAGGCCTGGCAGCCACCCGCCGCAGCGGCCTGGAGCGTAG
CGCTGGGCATGCTCGGTGCGCTCTGCTGGCTGGCGCCGGCGGGCTTGCCGTTGCGTGCCCTCGGCGCCGCATTGCTGCTG
CCGGCGTTGTTACCGTCATCGCCCCCTGTCGAATGGGGGCGGGCGGAAGTGCGGGTGCTGGACGTCGGTCAGGGGCTGGC
CGTGCTGGTGCGTACCCGGGGGCATGCCCTGCTCTACGACAGCGGTGCGCGGCAGGGGGCGTTCGACATGGGCGAGCGGG
TGGTAGTGCCGGTGCTGCGCAGCCTGGACCTGCGGCGCCTGGACGGCCTGTTGCTGAGCCATGCCGACAACGACCATGCA
GGCGGTGCTCCTACGGTCGCTTCCCGATTCCCGCCGGGTTGGCTGGTCAGCGGCGAACCCGCGCGCCTGCCTTCGCCGTT
GCTCGCCGACAGCTGCGACGAGCGGAGCTGGTCCTGGGATGGCGTGGTTTTCGAACAGTGGGCATGGGCGCAGGCCAGCG
ACAGCAACGAACGCTCCTGCGTGCTGAGGGTCGAGGCCGATGGCGAAGTCCTGCTGCTGACCGGGGACATCTCGCGCGCG
GCCGAGCATGCCTGGCTGGCGCGACAGGCCGATCCGCGGGTCGACTGGTTGCTGGCACCGCATCACGGCAGCCGCAGCTC
CTCCGGAGTCGCCTTCGTGTTGCGTGCGCGGCCTCGCCATGTGCTGGTGTCGCGAGGTTGGCGCAACGCCTTCGGCCATC
CCCATGGCGAAGTGATGGAGCGTTACGCGAGGGTCGCCGCGCAGGTCCACGACACGGCACGCGACGGTGCCCTGACGTTT
CTCCTCGGAAGCCGTGGCGGCGCACGCCGGGAGCGTGATTCGGCGCACTTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (201-464)

• Metallo-beta-lactamase superfamily (Lactamase_B) (501-673)

• Domain of unknown function (DUF4131) (DUF4131) (21-168)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	59.501	97.301	0.579
comA	Ralstonia pseudosolanacearum GMI1000	35.742	100	0.367